Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02120 ATGGGTGACAAGTCCCAAGTATTGGAGGCTGTGTTGAAGGAAGCTGTAGATTTGGAGAATATTCCCATTGAGGAGGTTTTTGAGAATCTGAGATGTAGCAAAGAAGGTCTCAGCAGTGAGGCTGCTGAGGAGAGGTTGGTCATTTTTGGCCACAACAAGCTTGAAGAGAAAAAGGAGAGCAAATTCTTGAAGTTCTTGGGTTTTATGTGGAACCCTCTGTCTTGGGTTATGGAGGCTGCTGCTATAATGGCAATTGCACTTGCCAATGGAGGGGGAAAGCCCCCTGATTGGCAAGATTTTGTTGGTATCATCACCTTGCTTCTCATCAATTCAACTATCAGTTTCATTGAGGAGAACAATGCCGGTAATGCTGCGGCAGCTCTCATGGCTCGGCTTGCTCCGAAAGCAAAGGTCCTTCGTGATGGTAGATGGAGTGAGCAAGATGCCGCGGCCCTGGTTCCTGGTGACATAGTTAGCATTAAACTTGGCGATATTATACCGGCTGATGCTCGTCTTCTTGAAGGGGATCCTTTGAAAATTGATCAGTCTGCTCTTACGGGTGAGTCCCTTCCAGTAACAAAGGGCCCTGGCGATGGAGTGTATTCTGGTTCTACCTGCAAACAAGGAGAGATTGAAGCTGTGGTCATCGCCACCGGCGTTCATACCTTCTTTGGGAAAGCTGCTCACCTTGTAGATACCACTAATCAAGTGGGACACTTTCAAAAGGTGTTGACTGCAATTGGAAACTTCTGCATATGTTCAATTGCTGTGGGGATGGTTATTGAGATTATTGTTATGTATCCCATCCAAGATCGTGATTATCGCCCTGGAATTGATAACCTTCTTGTGCTTCTTATTGGTGGAATTCCAATTGCCATGCCCACTGTCCTCTCAGTGACTATGGCCATTGGTTCTCATAGGCTATCGCAGCAGGGGGCTATCACAAAAAGGATGACAGCTATTGAAGAGATGGCAGGCATGGATGTGCTTTGCAGTGACAAGACTGGGACCTTGACATTAAATAAGCTTACAGTTGACAAAAATCTTATTGAGGTTTTTGCAAAAGGAGTGGATGCGGATACTGTTGTTTTGATGGCAGCTCAAGCTTCAAGACTTGAGAATCAAGATGCAATAGACACTGCCATAGTTGGAATGTTGGCTGATCCAAAAGAGGCTCGTCTTGGCATCCAAGAAGTACATTTTCTTCCTTTCAATCCCACTGATAAGAGGACAGCATTGACTTACATTGATCGTAATGGTAAAATGCATAGAGTAAGCAAAGGTGCACCAGAACAGATCCTTAATCTTGCACACAATAAATCAGACATTGAACGTAGAGTTCATGCAGTGATAGATAAGTTTGCAGAGCGCGGTTTACGATCCCTTGCAGTAGCATTCCAGGATGTTCCAGATGGAAGGAAAGAGAGCCCGGGTGGCCCGTGGCAGTTTATTGGTCTTTTAGCTCTGTTTGACCCACCTAGGCATGATAGTGCAGAAACAATACGCAGGGCACTAAACCTTGGAGTGAATGTCAAAATGATTACAGGGGATCAGCTAGCTATAGGAAAGGAAACTGGCCGTCGCTTGGGAATGGGTACCAATATGTATCCTTCATCTGCATTGCTTGGGCAGGATAAGGATGAATCCATATCTGCTTTACCCATTGATGAACTAATTGAAAAGGCTGATGGATTTGCTGGTGTTTTTCCTGAGCACAAGTATGAGATTGTGAAACGCTTGCAAGCTAGGAAACATATTTGTGGAATGACTGGTGATGGAGTGAACGATGCGCCTGCACTCAAGAAGGCAGACATTGGTATAGCTGTTGCTGATGCAACTGATGCAGCTCGGAGTGCATCTGATATTGTTTTAACAGAACCTGGCCTTAGTGTTATTATTAGTGCAGTGTTGACAAGCCGAGCTATCTTCCAGAGAATGAAAAATTATACAATTTATGCTGTCTCAATTACAATTCGTATAGTACTTGGTTTCATGTTACTGGCTCTCATATGGAAGTTTGATTTTCCACCTTTTATGGTGCTTATTATTGCCATTCTAAATGATGGTACTATCATGACAATTTCAAAAGATCGAGTAAAACCATCACCTCTGCCAGATAGCTGGAAGCTAGCCGAGATATTTACTACTGGCGTCGTGCTTGGAAGTTACTTGGCAATGATGACAGTCATATTCTTTTGGGCAGCATACAAAACCAATTTCTTCCCGCGAGTATTTGGAGTTTCTACTCTTGAGAAAACTGCTCATGATGATTTCCGAAAACTGGCCTCTGCAATCTATCTTCAAGTGAGCACTATTAGTCAGGCTTTAATATTTGTGACTCGGTCACGGGGTTGGTCTTATGTTGAACGTCCTGGTATTTTGCTTGTGACAGCCTTCGTGATTGCTCAGCTGGTAAGCCAATTAAGCATTTATTCTGTTACAATTTTTCCAATTACATCAAGGACCACTTTGGTGATTACTCTGTTTTTCACAGATTGCCACTTTGATTGCGGTATATGCCAACTGGAGCTTTGCTGCCATTGA 2544 0.4367 MGDKSQVLEAVLKEAVDLENIPIEEVFENLRCSKEGLSSEAAEERLVIFGHNKLEEKKESKFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLLINSTISFIEENNAGNAAAALMARLAPKAKVLRDGRWSEQDAAALVPGDIVSIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHFQKVLTAIGNFCICSIAVGMVIEIIVMYPIQDRDYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFAKGVDADTVVLMAAQASRLENQDAIDTAIVGMLADPKEARLGIQEVHFLPFNPTDKRTALTYIDRNGKMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAFQDVPDGRKESPGGPWQFIGLLALFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESISALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVVLGSYLAMMTVIFFWAAYKTNFFPRVFGVSTLEKTAHDDFRKLASAIYLQVSTISQALIFVTRSRGWSYVERPGILLVTAFVIAQLVSQLSIYSVTIFPITSRTTLVITLFFTDCHFDCGICQLELCCH 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02120 847 FunFam Plasma membrane ATPase 483 638 - -
Pumo10g02120 847 SUPERFAMILY Calcium ATPase, transduction domain A 134 231 IPR008250 -
Pumo10g02120 847 PANTHER CALCIUM-TRANSPORTING ATPASE 19 825 - -
Pumo10g02120 847 NCBIfam HAD-IC family P-type ATPase 565 678 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pumo10g02120 847 NCBIfam HAD-IC family P-type ATPase 103 352 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pumo10g02120 847 CDD P-type_ATPase_H 36 831 IPR006534 GO:0008553|GO:0016020|GO:0120029
Pumo10g02120 847 Gene3D - 96 811 - -
Pumo10g02120 847 FunFam Plasma membrane ATPase 134 218 - -
Pumo10g02120 847 FunFam Plasma membrane ATPase 343 490 - -
Pumo10g02120 847 Pfam Cation transporter/ATPase, N-terminus 20 83 IPR004014 -
Pumo10g02120 847 Pfam E1-E2 ATPase 132 310 - -
Pumo10g02120 847 SFLD p-type atpase 313 641 IPR044492 -
Pumo10g02120 847 Gene3D - 343 490 IPR023299 GO:0000166
Pumo10g02120 847 SUPERFAMILY HAD-like 327 637 IPR036412 -
Pumo10g02120 847 Gene3D - 328 627 IPR023214 -
Pumo10g02120 847 SMART Cation_ATPase_N_a_2 17 89 IPR004014 -
Pumo10g02120 847 ProSitePatterns E1-E2 ATPases phosphorylation site. 333 339 IPR018303 -
Pumo10g02120 847 PRINTS H+-transporting ATPase (proton pump) signature 447 465 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pumo10g02120 847 PRINTS H+-transporting ATPase (proton pump) signature 766 787 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pumo10g02120 847 PRINTS H+-transporting ATPase (proton pump) signature 590 606 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pumo10g02120 847 PRINTS H+-transporting ATPase (proton pump) signature 621 646 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pumo10g02120 847 PRINTS H+-transporting ATPase (proton pump) signature 562 578 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pumo10g02120 847 FunFam ATPase 4 plasma membrane-type 575 818 - -
Pumo10g02120 847 SFLD Haloacid Dehalogenase 313 641 - -
Pumo10g02120 847 Gene3D - 134 218 - -
Pumo10g02120 847 NCBIfam plasma-membrane proton-efflux P-type ATPase 36 808 IPR006534 GO:0008553|GO:0016020|GO:0120029
Pumo10g02120 847 PRINTS P-type cation-transporting ATPase superfamily signature 613 625 - -
Pumo10g02120 847 PRINTS P-type cation-transporting ATPase superfamily signature 507 517 - -
Pumo10g02120 847 PRINTS P-type cation-transporting ATPase superfamily signature 485 496 - -
Pumo10g02120 847 PRINTS P-type cation-transporting ATPase superfamily signature 181 195 - -
Pumo10g02120 847 PRINTS P-type cation-transporting ATPase superfamily signature 331 345 - -
Pumo10g02120 847 PRINTS P-type cation-transporting ATPase superfamily signature 590 609 - -
Pumo10g02120 847 SUPERFAMILY Calcium ATPase, transmembrane domain M 17 812 IPR023298 -
Pumo10g02120 847 Pfam haloacid dehalogenase-like hydrolase 327 604 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02120 Pumo-Chr10 28625156 28631737 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02120 1 812 Primary Pumps ATPases AT5G62670 92.251 0.0 1499
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02120 K01535 - gmx:100782459 1505.73