Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02118 ATGGGAAACTGCAACGCGTGTGCGAAAGCCGATGTTGTCGAAGACAACAATAACAGCAACAACAATAGGAATAAGAAGTCTAAAGAAACGAACCGCGGTCGGAAGAAAGAGTCGAACCAGAAAAAACCGAACCCGTTCTCGGACGAACCGGGCCGGTCGGCGGCGGCCCCGATCCGCGTCTTGAAAGACGTGATTCCAATGAGCCACCGGACGCGCATAAGCGACAAGTACATACTGGGCCGGGAATTGGGCCGGGGCGAGTTCGGCATCACATACCTCTGCACGGACCGCGAGACCAAGGAGGCCCTGGCCTGCAAGTCGATCTCCAAGAGGAAGCTCCGGACCGCCGTGGACATCGACGACGTGAGGCGCGAGGTCGCCATCATGTCCACGCTGCCGGAGCACCCCAACGTCGTGAAGCTGAAGGCAACTTATGAGGACAACGAGAACGTGCACCTCGTCATGGAGCTTTGTGAAGGAGGTGAACTCTTCGACCGGATTGTCGCCCGCGGACACTACAGCGAGCGCGCCGCGGCCGCCGTCGCACGCACCATCGCCGAGGTTGTTAGGATGTGCCACAGCAATGGCGTCATGCATAGGGACCTCAAGCCTGAGAATTTCCTCTTCGCTAATAAGAAAGAGAATTCCTCTCTCAAGGCCATCGATTTTGGCCTTTCCGTCTTCTTCAAGCCAGGGGAGAGGTTTTCGGAGATTGTTGGGAGTCCTTACTATATGGCGCCAGAGGTTTTGAAGCGGAATTACGGGCCTGAGGTTGATGTTTGGAGTGCTGGGGTGATTCTTTATATTTTGTTGTGTGGGGTTCCTCCGTTTTGGGCAGAGACTGAGCAAGGTGTGGCTTTGGCGATCTTGAGGGGTGTGATTGACTTCAAGAGGGAACCTTGGCCTCAAATATCGGAGGGTGCTAAGACCCTTGTGCGGCGAATGTTGGAGCCGGATCCTAAAAAGCGCTTGACAGCTGAGCAGGTGCTTGAACATCCCTGGCTGCAAAATGCAAAGAAAGCTCCAAATGTTCCATTAGGAGATATTGTGAGGTCAAGGCTTAAGCAGTTTTCTGTGATGAATAGATTCAAAAAGAAAGCTCTGCGGGTAATTGCAGAGCATTTATCTGTCGAAGAGGTAGAAATAATCAAAGATATGTTTACATTGATGGATACTGACAAAGATGGCAGAGTAACATATGAGGAACTGAAGGCTGGGATGAGGAAGGTTGGTTCACAATTGGCTGAGCCAGAGATAAAGATGCTGATGGAAGTGGCTGATGTTGATGGGAATGGAGTACTCGACTATGGAGAGTTTGTGGCTGTTACAATTCACTTGCAAAAAATGGAGAATGATGAGCATTTCCACAAAGCATTCAAGTTTTTCGACAAAGATGGGAGTGGGTATATTGAGTTAGGAGAGCTAGAGGAAGCATTAGCAGATGAGTCAGGAGAAACTGATGCTGATGTATTGAATGACATCATGCGTGAAGTTGACACCGACAAGGATGGTCGCATCAGTTATGAGGAGTTTGTGGCCATGATGAAAACTGGAACTGACTGGAGAAAAGCATCTAGGCAATATTCAAGGGAGAGATTCAAGAGTTTGAGCCTAAATTTGATGAAGGATGGTTCACTTCAGCTTCATGATGGACTTACTGGTCAAGCTGTGGTGGTTTGA 1680 0.4982 MGNCNACAKADVVEDNNNSNNNRNKKSKETNRGRKKESNQKKPNPFSDEPGRSAAAPIRVLKDVIPMSHRTRISDKYILGRELGRGEFGITYLCTDRETKEALACKSISKRKLRTAVDIDDVRREVAIMSTLPEHPNVVKLKATYEDNENVHLVMELCEGGELFDRIVARGHYSERAAAAVARTIAEVVRMCHSNGVMHRDLKPENFLFANKKENSSLKAIDFGLSVFFKPGERFSEIVGSPYYMAPEVLKRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVALAILRGVIDFKREPWPQISEGAKTLVRRMLEPDPKKRLTAEQVLEHPWLQNAKKAPNVPLGDIVRSRLKQFSVMNRFKKKALRVIAEHLSVEEVEIIKDMFTLMDTDKDGRVTYEELKAGMRKVGSQLAEPEIKMLMEVADVDGNGVLDYGEFVAVTIHLQKMENDEHFHKAFKFFDKDGSGYIELGELEEALADESGETDADVLNDIMREVDTDKDGRISYEEFVAMMKTGTDWRKASRQYSRERFKSLSLNLMKDGSLQLHDGLTGQAVVV 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02118 559 SUPERFAMILY Protein kinase-like (PK-like) 60 360 IPR011009 -
Pumo10g02118 559 SUPERFAMILY EF-hand 363 542 IPR011992 -
Pumo10g02118 559 Gene3D Phosphorylase Kinase; domain 1 78 162 - -
Pumo10g02118 559 ProSitePatterns EF-hand calcium-binding domain. 499 511 IPR018247 -
Pumo10g02118 559 ProSiteProfiles EF-hand calcium-binding domain profile. 450 485 IPR002048 GO:0005509
Pumo10g02118 559 SMART efh_1 454 482 IPR002048 GO:0005509
Pumo10g02118 559 SMART efh_1 490 518 IPR002048 GO:0005509
Pumo10g02118 559 SMART efh_1 382 410 IPR002048 GO:0005509
Pumo10g02118 559 SMART efh_1 418 446 IPR002048 GO:0005509
Pumo10g02118 559 ProSitePatterns EF-hand calcium-binding domain. 391 403 IPR018247 -
Pumo10g02118 559 FunFam Calcium-dependent protein kinase 1 79 162 - -
Pumo10g02118 559 ProSiteProfiles EF-hand calcium-binding domain profile. 378 413 IPR002048 GO:0005509
Pumo10g02118 559 CDD EFh 454 516 IPR002048 GO:0005509
Pumo10g02118 559 ProSiteProfiles Protein kinase domain profile. 77 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g02118 559 ProSitePatterns EF-hand calcium-binding domain. 427 439 IPR018247 -
Pumo10g02118 559 ProSitePatterns Serine/Threonine protein kinases active-site signature. 197 209 IPR008271 GO:0004672|GO:0006468
Pumo10g02118 559 ProSitePatterns Protein kinases ATP-binding region signature. 83 106 IPR017441 GO:0005524
Pumo10g02118 559 MobiDBLite consensus disorder prediction 21 43 - -
Pumo10g02118 559 Pfam EF-hand domain pair 383 442 IPR002048 GO:0005509
Pumo10g02118 559 Pfam EF-hand domain pair 453 516 IPR002048 GO:0005509
Pumo10g02118 559 CDD STKc_CAMK 76 334 - -
Pumo10g02118 559 ProSiteProfiles EF-hand calcium-binding domain profile. 414 449 IPR002048 GO:0005509
Pumo10g02118 559 ProSitePatterns EF-hand calcium-binding domain. 463 475 IPR018247 -
Pumo10g02118 559 Pfam Protein kinase domain 79 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g02118 559 ProSiteProfiles EF-hand calcium-binding domain profile. 486 521 IPR002048 GO:0005509
Pumo10g02118 559 PANTHER SERINE/THREONINE-PROTEIN KINASE 69 511 - -
Pumo10g02118 559 Gene3D Transferase(Phosphotransferase) domain 1 163 343 - -
Pumo10g02118 559 SMART serkin_6 77 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g02118 559 FunFam calcium-dependent protein kinase 13 163 343 - -
Pumo10g02118 559 Gene3D - 344 519 - -
Pumo10g02118 559 FunFam Calcium-dependent protein kinase 7 344 519 - -
Pumo10g02118 559 MobiDBLite consensus disorder prediction 1 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02118 Pumo-Chr10 28570735 28575193 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02118 1 559 EF-hand Containing Proteins AT1G74740 80.501 0.0 933
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pumo10g02118 Pkinase 2.8e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02118 K13412 - gmx:100809838 1029.24