Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02116 ATGGGGTGGGTGGCGAATCGCTGGACGGGCGTCGCCGCCGCCATATGGATCCAGTGGAGCTGCGGCGCATCCTACACCTTCAGTATCTACTCCTCTGTGCTCAAGTCCACGCAGGGCTACGACCAATCCACGCTCGACACCGTCTCTGTCTTCAAGGACATCGGCGCCAACTTCGGCGTCCTCTCCGGCCTCCTCTACTCCGCCGTCGCCCCCTACGCCCCCCGCGGCTCCCCCTCCAAGTCCAAATGGACCTCGCTCGCCGGGCCCTGGGTCGTCGTCGCGGCCGGCGCGGTCCAGTGCTTCGTGGGCTTCCTCTTCATCTGGGCCTCCGTCGTGGGCCTCATAAGCCCACCGCCCGTGCCTGTCATGTGCTTCTTCGCGTGGCTCGCCTCCAACGGTCAGACCTTCTTGAACACCACCAATGTCGTTACCGGCTTGCGCAATTTCCCTGAGTATAGCGGCACCATCATTGGTATCATGAAGGGATTTCTTGGACTGAGTGGAGCTATCTTGATCCAAATCTACCATACGTTTTTTGATGGGGACCCGGCGACGTACCTTTTGATGCTTGCTTTGTTGCCTTCATTCATCTCTGTGTTGCTTATGTTCTTGCTGAGGATTTATGAAGTGCATGGCAGTGATTACAAGAAGCATTTGGATGGTTTCTCTGTGGTTACTGTGATTATTGTAGCCTATCTCATGTTCATAATAATTTTACAGAACTTAGTTAGTTTACCATATTGGGGACGGATGTTTGCATTTGTGATCCTTATGATTCTGCTAGCATCGCCTTTTGGAATTGCTATCAAGGCCCATTGGGAAGAGTTGCGGAAATTTGCACAATCCTACACCATCGAGAGGGGTTCTTCTACAAATAAGGGTACCACTTCCTCCAGTCATTCTGCATCAGTGGATCACGTGGAGTACCATGAGTTGCCTAGTGATGAGGGGCAGGTACAAATGACTTCAGATGACAAGTTGCCCCATGAAGAAGAAAAGAACCTCTTGCAAGCTATGTGCACAGTTGATTTTTGGATGTTGTTTGTGATCATGATATCGGGGTTGGGTTCTGGGCTTGCTACTATAAATAATATGAGCCAAATAGGACAATCCCTTGGATATAGTACCATTGAGATTAATAATTTGGTGTCGCTGTGGAGTATGTGGAACTTCCTCGGTCGTTTTGGAGGTGGCCAAATATCAGATTATATAATGCACAGAAAAGGTTGGCCAAGGCCCCTGTTGATGACAACAACTCTGGGGATAATGATTCTTGGCCATTTAATTATAGCATCTGGTTTCCGTGGAAATTTGTATTTGGGTCCTGTCCTGGTGGGCATCTGCTATGGTGCACATTGGTCCTTGATGCCCACAATCACTTCTGAGATATTTGGTGTAAAGCATATGGGTACCATTTTCAATACTATTGCTGCAGCAAGTCCACTTGGATCTTATATACTTTCTGTGAGAGTTGTTGGATATATTTATGACAAGCAAGCCGATAAAGATGATAATTCGTGCTTTGGCATCGACTGTTTCATGTCGTCATTTTTTATCCTGGCAGGGGTAGCTTTTCTTGCATTTTTGGTTGGTTTGGCGTTATACTTCCGGACCCGAAGGTTCTATAAGCAAGTTGTGCTTAGAAGATTAAAACATTATGCAAGATGA 1668 0.4796 MGWVANRWTGVAAAIWIQWSCGASYTFSIYSSVLKSTQGYDQSTLDTVSVFKDIGANFGVLSGLLYSAVAPYAPRGSPSKSKWTSLAGPWVVVAAGAVQCFVGFLFIWASVVGLISPPPVPVMCFFAWLASNGQTFLNTTNVVTGLRNFPEYSGTIIGIMKGFLGLSGAILIQIYHTFFDGDPATYLLMLALLPSFISVLLMFLLRIYEVHGSDYKKHLDGFSVVTVIIVAYLMFIIILQNLVSLPYWGRMFAFVILMILLASPFGIAIKAHWEELRKFAQSYTIERGSSTNKGTTSSSHSASVDHVEYHELPSDEGQVQMTSDDKLPHEEEKNLLQAMCTVDFWMLFVIMISGLGSGLATINNMSQIGQSLGYSTIEINNLVSLWSMWNFLGRFGGGQISDYIMHRKGWPRPLLMTTTLGIMILGHLIIASGFRGNLYLGPVLVGICYGAHWSLMPTITSEIFGVKHMGTIFNTIAAASPLGSYILSVRVVGYIYDKQADKDDNSCFGIDCFMSSFFILAGVAFLAFLVGLALYFRTRRFYKQVVLRRLKHYAR 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02116 555 ProSiteProfiles Major facilitator superfamily (MFS) profile. 342 555 IPR020846 GO:0022857
Pumo10g02116 555 CDD MFS_Mch1p_like 7 527 - -
Pumo10g02116 555 SUPERFAMILY MFS general substrate transporter 6 207 IPR036259 -
Pumo10g02116 555 Gene3D MFS general substrate transporter like domains 330 552 IPR036259 -
Pumo10g02116 555 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 8 543 - -
Pumo10g02116 555 Pfam Major Facilitator Superfamily 347 540 IPR011701 GO:0022857|GO:0055085
Pumo10g02116 555 Pfam Nodulin-like 88 268 IPR010658 -
Pumo10g02116 555 Pfam Nodulin-like 7 69 IPR010658 -
Pumo10g02116 555 SUPERFAMILY MFS general substrate transporter 229 540 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02116 Pumo-Chr10 28539969 28542146 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02116 1 552 Nodulin-like Gene Family AT1G74780 55.415 0.0 603
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02116 - - gmx:100775628 1040.02