Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02108 ATGTCCCAGGGATCTCCCCCACAAGACACCACCGAACCCTCGCCGGAACCCGATTCGCATAAGGAAGAAACTAGCACCACCACCAACAGCAACAACAACACCGCCGCTACCGCCGCCGTTACCATCGCTGCCGATGCTGCTCCTCCGGCCCCGACCCGGAACCGCCCCTCCCGCGCCTGCACCATTCGAGCCGCGGCGCGCCTCTACTCGGCGTCGCAGCCGGCGAGGCCGAAGGCCGCGAGGAGGGAGCCCCGCCGCGAGGAGTCGCCGGCGGCGCCGCAGCTGCAGCAATGCAGCAAGATCGTGACGCCGCTGGTGGAACCGCCCACGCCGGCGCAGTTGCCGCGCCACAACCTCCGGTCCATGTGGGAATTGGCTTCAATACTCAATTTTTTGAATCTGTTTAGGCCTCTTTTGAATATTTCAGTAGAATTCTCGGCTGAAGAGTTTGAGACGGCTTTGCTCACCCCCAATGACACATTGGGTGATATACATATGCCTTTGCTAAAGGCAATTCCTCCCATTACGCGAATGGCACTCTCACGTGATACTTGGATAACCGTATTATGCAGAAAATTGAGAGATTGGTGGCACTGGGTTGCCGATGGAGATCTTCCTATTGTTGCTTCACATGGAGCGGAGGTTGAAGTATATAAATCACTTGATCCAGGGGTTCGTGTGGTCATCTTAAAAGCATTGTGTGACATTCGTGTTGAGCAAGAAGATATCAGAGGTTATATTGACAGCTCAATCAAACATGGCATTCCACTTTCGACATTCCGGAAGGAGCGTATTGGTGGTGATTCACATGGAGTTTCTTATTGGTATGAAGATGACCAAATTATTGGTCATAGGTTGTATCGGGAAATAAGGAAAACTGAGGTTTTTCAAATGAAGAAAGGGAAACCAAGAGGTTCCCAGGTTTTTTCTAATACAACTTACCAGTGGGAAACAGTTGCTACCAATTTTGATGAATTTCAGGATGTTTCTGAGAAGCTTTTCACAAGTAAAAACAGAATGGAGGCTTCTGTAGGGAAGAAGGTGAAGATAGACATGCTCCCTGAAATTGAGAAAGTTCACAAGAGAAAGGAGAGGTTGCTGAAAAAACAACACAGACAAGCTCTTCTTCTTGATAATTTCTTGGGTGTTGATGGGCTTGCCCCAGGGCGTTCACTTCGTGATAGGAAACCTGTTACCTACACTTTTGATGATTATGATCGATCCATCAATGAGGCAATTAAGATAACCAAACGGAAACCACCATCCCCAGAACCTATACCCAGGAGAGAAGCAGGAGAGAAACCTGAAGCTTTAACCAATGGTAAATGGAGTGGTCCTTCACATGACCCTCAAGACCTGAATTTTGGCATGCCATCTCCAAAATCACCTGACTATGATGATATGGAGGAAGAGAATCAAACTGACATGTTGGACTTGGATAGAAGCAATCGGCGAAGACAGAAGCCTAAACGGTATTCAGAGAAAGAGTTTGTTGAAGCAGTGTCGGATAATGAGGCTGACTATGACAGCGATGATGATATTGTTGGAGAAGCCGTGTATGATGAAGAGTATCTCCGGAAACGTAAGCAGAGAAGGAAGGCTTCTAGTAGCTCTGGCTCTGAAGGGGATGAAGAATATCATTGGGATGAAGATAATGTTGAAGATGAAGAAGAAGATGACGAAGAAGATTCCTTGAGTGTCAGTGAGGATAGTGACAAGCCCCGTAAATTCAAGCGACTGCCAGGCCGTACTAGGAGGGAAACTAAACTCAGGTCTGTGGGTGAGATTCAATCAGGTTTAAGACGCAGTAAGAGGGCGACAACTAGAAGCCGTGTAAATTACCGAAAGTACGAGATATCTGATTCAGAAACAGAGTTCATTAAATCTGACAAGTCTAATGCATCAGATGATCACTCAGATCCTACTGAGAATGGGGAGTATATGATGGAAAGTGAAGACTCCGATGACAACAATGACGAGGAAGAACAAGAAATCAAAGTAGTTGAGCCTGTTACATACCCTGCAGAAGAAAACAACCAATACCCTGCTGTAGAAGAAGAGAATGAACAAAACCAAAACCAGCCTCCTGAAAAATCTAGTAGTCCAGGTCAGGAGGAAGTTGAGGGCACCGCAAAGCGACGTTTCCTTGATTTGAATGAGCTTGCCCCTAGCTCAGGTTTTGATGATGGTCCAAATACAACAATGAAAGATGAAGGCAATGATGATAACTGA 2232 0.4682 MSQGSPPQDTTEPSPEPDSHKEETSTTTNSNNNTAATAAVTIAADAAPPAPTRNRPSRACTIRAAARLYSASQPARPKAARREPRREESPAAPQLQQCSKIVTPLVEPPTPAQLPRHNLRSMWELASILNFLNLFRPLLNISVEFSAEEFETALLTPNDTLGDIHMPLLKAIPPITRMALSRDTWITVLCRKLRDWWHWVADGDLPIVASHGAEVEVYKSLDPGVRVVILKALCDIRVEQEDIRGYIDSSIKHGIPLSTFRKERIGGDSHGVSYWYEDDQIIGHRLYREIRKTEVFQMKKGKPRGSQVFSNTTYQWETVATNFDEFQDVSEKLFTSKNRMEASVGKKVKIDMLPEIEKVHKRKERLLKKQHRQALLLDNFLGVDGLAPGRSLRDRKPVTYTFDDYDRSINEAIKITKRKPPSPEPIPRREAGEKPEALTNGKWSGPSHDPQDLNFGMPSPKSPDYDDMEEENQTDMLDLDRSNRRRQKPKRYSEKEFVEAVSDNEADYDSDDDIVGEAVYDEEYLRKRKQRRKASSSSGSEGDEEYHWDEDNVEDEEEDDEEDSLSVSEDSDKPRKFKRLPGRTRRETKLRSVGEIQSGLRRSKRATTRSRVNYRKYEISDSETEFIKSDKSNASDDHSDPTENGEYMMESEDSDDNNDEEEQEIKVVEPVTYPAEENNQYPAVEEENEQNQNQPPEKSSSPGQEEVEGTAKRRFLDLNELAPSSGFDDGPNTTMKDEGNDDN 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02108 743 MobiDBLite consensus disorder prediction 611 645 - -
Pumo10g02108 743 MobiDBLite consensus disorder prediction 413 743 - -
Pumo10g02108 743 MobiDBLite consensus disorder prediction 684 706 - -
Pumo10g02108 743 PANTHER REMODELING AND SPACING FACTOR 1 51 738 IPR028938 GO:0006355|GO:0031213
Pumo10g02108 743 MobiDBLite consensus disorder prediction 519 543 - -
Pumo10g02108 743 MobiDBLite consensus disorder prediction 1 96 - -
Pumo10g02108 743 MobiDBLite consensus disorder prediction 24 39 - -
Pumo10g02108 743 MobiDBLite consensus disorder prediction 413 436 - -
Pumo10g02108 743 MobiDBLite consensus disorder prediction 646 663 - -
Pumo10g02108 743 MobiDBLite consensus disorder prediction 503 518 - -
Pumo10g02108 743 MobiDBLite consensus disorder prediction 544 567 - -
Pumo10g02108 743 MobiDBLite consensus disorder prediction 475 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02108 Pumo-Chr10 28424826 28434328 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Pumo10g02108 DDT 0.00012 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02108 - - gmx:100816258 1239.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g01340 4 17037870 17047415 Pumo10g02108 10 28424826 28434328 PCT