Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02090 ATGTCAGCCCCTAGTCATGCAATTGTTAAGGCTGTGGCTGCCACAGCTGGGGCTATGTTACTTATTGCTGCTTTATTTGTTTACTTTTTTCACAAATATGTTCTTGCTAGATACCACCAGAGACACAAAGTTAGTACAAGTCTGCTTCGAGAATCAGGAGTGAACCTTGAGTATATTAACAAAGTTGGTGGCAATGTGAAGGGACTAATTGTTGAAGAAAATGGGGTTGATGTTCTTTATGTGATGGACACAGAAAGAAGGCCATTGATAACTGGATTCCAAAATAGTATATTCAATCCAAGTTTTGAACATGATGAGGAAGAAAAGAGAATTGATATAATGGTCCAAAGGTCCAAAGTATCCAAGCCTGAAATTCCGCAGGCATGTGAAAGTGAAACTCCAAGTTTGGTGGTTGGTCATGAGAATCAAGTTAAGCCAGTATCACAAACATCATCAGTTTCAACATCAGTAACACCAAGACAAAACTTGCCACAATCACCTCAGCTAGCACCTCCACTGCAACCACTACCACAATCTTCACCAATGATTCTTGAGAACAAGAAAACTCAACCATCACCACCACCACCACCTCCTCCTCCTCCTCCAAGTCGTCCTCCACCACCACCACCTGGTCCACCTCCACTTCCAAAGGCCAGTGGCTTCATTTCATCACTGAAACCCCCACCTGCTCCCAAAGGGAAAACAAACATAAGAAGCACTAAAGAGGGTATGGTAGGGGAGAGTTCAAGAGAGAAGGGTGTTGGTCAAACAAGGCTGAAGCCTCTACACTGGGATAAGGTTGTAGCAAATGTTGATCATTCAACAGTGTGGGATCAGATCAATGATGGCTCTTTCAGGTTTGATGATGAACTAATGGAATCACTCTTTGGATATTCAAGCAGCTACAAAACCAAAGAAAGAAACAGAACTCTTTCCACTTTGGCCAAGTCAAATTCCAATGCACCAACTCAAATATTCATTCTTGAGCCAAGAAAATCTCAAAACACTGCAATTGTGCTAAGATCACTTGCCATTTCTCGCAAGGGAATCTTGGATGCAGTTCTTGATGGTCAGGGACTAAGTGTTGAGACACTAGAAAGGCTCACTAAAATAGCTCCCACCCAAGAAGAGGAAGCCAAAATCATCCAATTCAGTGGCAACCCGGATCAGCTTGCTGATGCTGAGTCTTTCCTATACTACATTATTAAAGCAGTTCCAACAGCATTCAACCGTTTGAAAGCAATGCTTTTCAGGTCGAGTTATGATTGTGAAGTTCTTCAACTCAAGGAGCAGCTACAAACACTTGAAATGGGTTGCAAGGAGCTGAGAACTAGTGGTCTGTTTTTGAAACTCCTTGAGGCCATTCTCAAAGCCGGGAACCGGATGAATGCTGGAACATCAAGAGGCAATGCACAAGGTTTCAACCTGAGTTCTCTTAGAAAACTTTCTGATGTGAAAAGCACAGATGGGAAGACTAGTTTGCTTCACTTCATAGTGGAACAAGTGGTTCAGTCAGAAGGAAAAAGACAAGCTATGTATCAAAGGCACAAACTTCACATAAGCAAGGGTGAAACAAGCAATGTGAATAGACCTTATTCATATAGCCTGATACAGCAAGAGGCAGATAAAGAACATGTAATGCTTGGTTTGCAAGTGTTAGGTGGGCTAAGTGAAGAGTTGTCTGAATCAAAGAAAGCAGCTAGTATTGAGTATCACAATTTCATCACTATGTGTTCAACTCTCAATGCTCATGTTAGTGAAATTAGACAGATTATAACATGCTGTGGCAACACTAGGAGTGGTGGATTTATCAATGAAATGAAAGGGTTCCTAGAGGAGTGTGAGGGAGAACTTGAGGTGGTGCAAGAGGAGCAGACAAGGATCATGGAGCTTGTGAAGAAAACAAATGAGTACTATCTAGCAGGAGCATCCAAAGACAATATGGTAAACCCTTTTCAACTGTTTGTTATTGTAAAGAATTTTGTTGACATGGTAGATCAGGCTTGCATAGAACTAAAAAAGAAGGTAGAAAAGAAGAATGTGGGAGGAGAGGCCGTGTCAACAACACCACCTTTGTCACCATCAAAGAGGACGCCAGTCAGATTCCCCAACTTTGATTTGTATTTTCTGTCAAATGTGTCAGACACTACATCTTCTAGCCAATCAGAAGATGATTTCTGA 2181 0.4172 MSAPSHAIVKAVAATAGAMLLIAALFVYFFHKYVLARYHQRHKVSTSLLRESGVNLEYINKVGGNVKGLIVEENGVDVLYVMDTERRPLITGFQNSIFNPSFEHDEEEKRIDIMVQRSKVSKPEIPQACESETPSLVVGHENQVKPVSQTSSVSTSVTPRQNLPQSPQLAPPLQPLPQSSPMILENKKTQPSPPPPPPPPPPSRPPPPPPGPPPLPKASGFISSLKPPPAPKGKTNIRSTKEGMVGESSREKGVGQTRLKPLHWDKVVANVDHSTVWDQINDGSFRFDDELMESLFGYSSSYKTKERNRTLSTLAKSNSNAPTQIFILEPRKSQNTAIVLRSLAISRKGILDAVLDGQGLSVETLERLTKIAPTQEEEAKIIQFSGNPDQLADAESFLYYIIKAVPTAFNRLKAMLFRSSYDCEVLQLKEQLQTLEMGCKELRTSGLFLKLLEAILKAGNRMNAGTSRGNAQGFNLSSLRKLSDVKSTDGKTSLLHFIVEQVVQSEGKRQAMYQRHKLHISKGETSNVNRPYSYSLIQQEADKEHVMLGLQVLGGLSEELSESKKAASIEYHNFITMCSTLNAHVSEIRQIITCCGNTRSGGFINEMKGFLEECEGELEVVQEEQTRIMELVKKTNEYYLAGASKDNMVNPFQLFVIVKNFVDMVDQACIELKKKVEKKNVGGEAVSTTPPLSPSKRTPVRFPNFDLYFLSNVSDTTSSSQSEDDF 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02090 726 ProSiteProfiles Formin homology-2 (FH2) domain profile. 249 691 IPR015425 -
Pumo10g02090 726 MobiDBLite consensus disorder prediction 244 258 - -
Pumo10g02090 726 MobiDBLite consensus disorder prediction 120 258 - -
Pumo10g02090 726 SMART it6_source 251 680 IPR015425 -
Pumo10g02090 726 Coils Coil 604 624 - -
Pumo10g02090 726 Coils Coil 425 445 - -
Pumo10g02090 726 PANTHER FORMIN-RELATED 5 689 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Pumo10g02090 726 Gene3D Formin, FH2 domain 271 684 IPR042201 -
Pumo10g02090 726 SUPERFAMILY Formin homology 2 domain (FH2 domain) 205 679 - -
Pumo10g02090 726 MobiDBLite consensus disorder prediction 136 164 - -
Pumo10g02090 726 Pfam Formin Homology 2 Domain 256 665 IPR015425 -
Pumo10g02090 726 MobiDBLite consensus disorder prediction 188 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02090 Pumo-Chr10 28201110 28203813 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02090 8 724 FH2 protein (formin) Gene Family AT1G70140 38.949 8.22e-154 463
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02090 - - gsj:114409782 1167.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g02090 10 28201110 28203813 Pumo10g02090 10 28201110 28203813 ECH