Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02089 ATGGCTGCCGCCGGCGATGTTTTCAGGCAGGGTTTGCCGGATGTTGGTGCCGGCAAGTTACACGTGCTTGCTGTTGATGACAGCCACGTGGACCGCAAGGTCATTGAACGGTTGCTCAAAATCTCGTCTTGCAAAGTGACGGTGGTGGATAGTGGAAGCAGGGCTCTGCAGTATCTGGGGTTGGATGGGGATGAGAGTTCCATTGGTCTTGATAGTGTGAAGGTTAATTTGATAATGACGGATTATTCCATGCCGGGGATGACAGGATACGAATTGCTCAAGAAGATAAAGGAGTCATCTGTTTTTAGAGAGGTTCCAGTGGTGGTTATGTCGTCTGAGAATATCTTGACACGAATTGATAGTTGCTTGGAGGAAGGAGCAGAGGAGTTTTTGTTGAAACCTGTCAAGTTGGCAGATGTAAAACGCGTTACAGATTTCATCATGAGAGGTGAAGGGAAGAAAGGAGTAAAAAGATCTCGAAAAAGAAGCAGATCAGATGATTGCATTCCATCTCTATCAACTGTATTCTCATCAGTTTCTCATCCATGCGATCTATCGTCATCATCTCCATCACCATGTGTATCGCACTCGAAGAAATCTAGATTGAGCATAGATTAA 618 0.4515 MAAAGDVFRQGLPDVGAGKLHVLAVDDSHVDRKVIERLLKISSCKVTVVDSGSRALQYLGLDGDESSIGLDSVKVNLIMTDYSMPGMTGYELLKKIKESSVFREVPVVVMSSENILTRIDSCLEEGAEEFLLKPVKLADVKRVTDFIMRGEGKKGVKRSRKRSRSDDCIPSLSTVFSSVSHPCDLSSSSPSPCVSHSKKSRLSID 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02089 205 SMART REC_2 20 144 IPR001789 GO:0000160
Pumo10g02089 205 ProSiteProfiles Response regulatory domain profile. 21 148 IPR001789 GO:0000160
Pumo10g02089 205 CDD REC_typeA_ARR 22 143 - -
Pumo10g02089 205 MobiDBLite consensus disorder prediction 178 205 - -
Pumo10g02089 205 Gene3D - 19 181 - -
Pumo10g02089 205 PANTHER TWO-COMPONENT RESPONSE REGULATOR 20 187 IPR045279 GO:0009736
Pumo10g02089 205 Pfam Response regulator receiver domain 22 141 IPR001789 GO:0000160
Pumo10g02089 205 SUPERFAMILY CheY-like 19 148 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02089 Pumo-Chr10 28192594 28195020 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02089 11 162 Response Regulator Gene Family AT5G62920 74.342 3.08e-75 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pumo10g02089 Response_reg 9.2e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02089 K14492 - gmx:100819165 315.849
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g02089 10 28192594 28195020 Pumo10g02089 10 28192594 28195020 ECH