Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02069 ATGGCCAATTCAGAAGAAGAAGAGGTGATCAAGGCCCTAGTCACGTTCATGGACAAATTGGCACCAGGGAATGTACCAAGAGACCCTATGTGGGGTTGGAACCTTACCTCAGATCCCTGCATTGATAAGTGGCATGGTGTGAAGTGCTACTCAGACAACAAATATGTTAAGAGTATAATTCTTCAGAAATTCAACTTTGGTGGAGTTGTAGACGCTAGTTCTCTTTGCATTGCAAAGTCTCTTCAAATCCTTAGTCTGAGGGACAACACTTTACATGATTCGGTATCAGAGGATATAGGAAATTGCAAGTTTTTGACTCACTTGCTTTTAAGTGGGAACCAACTCTCTGGGGACCTTCCTGTTTCTATTGGCAATCTAAGCAACATGAAACGGCTTCAGGTTTCTGACAATCACTTCACTGGAGAGCTTCCTAACATGGTTCATGTTTCAAGTTTGATATCCTTTTTTGCTCAAAACAACAACTTCACTGGGGAGATTCCTAGTTTTGACTTCTCCAACCTTGATGCCTTTAATGTCTCTAACAACAATTTACAAGGTCCAGTTCCTGATGTCAAAGGCAAATTCCATGAAGACAGCTTTTCTGGGAATCCTAACTTATGTGGAAAACCACTTTCAAATGCATGTCGACCACCTCCTCCTCCTCCTCCACCACCTGAAAAGAAGGACCAAAAATCGTTCCCTAATGATTTGTCCATTTATTCAGGTTACTTAGTCCTTGGTTTAATTGTCCTGATTTTCTTGACCTTCAAACTTTTAAGTAAGTTCAAGACCAAAGAAAAAGCATTGGATGTTGAAAAGAAGGAAATGGCACAAGAAACTGTTGGTGTTGTTGGCAAGGCTAGTGAAATATCCAATTCCAATGGATCAAAGAATGGCACTGTGATTAGATCCGAGTGTTCCTTCACATCTTTGGAAAGTGGGATGACAACATCAGGTCTTGTTCTTCTTTCAAGTCGAACGCTTAGAGGATTGCAATTTGAGGACTTGCTTGGTGCCCCTGCTGAATTGATTAGGAGGGGAAAGCATGGAAGCCTCTACAAGGTTATGCTTGATAATGGGGTGCTGTTGGCAGTGAAGAGGATCAAGGATTGGGGGATTTCAAAGCAAGATTTTGAGAGAAGGATGAATTTGATAGCCCAAGTGAAGCATCCACTCGTATTGCCACCTGTTGCATACTATTGCTCTCAGCAAGAGAAGCTCCTAGCATATGAATATCTGCAGAATGGTAGTCTCTTCATGTTGCTCTATGGATCTCAAAGTGGCCACTCTTTTGACTGGGGAAGCAGACTAAACGTTGCTGCTAAGATAGCGGAGGCTTTGGCATATATGCATGAGGAGTTTCTTGAGAATGGAATAGCACATGGTAACTTAAAGTCAAGTAACATTTTGTTTGACAAGAATATGGATCCATGCATAAGCGAATATGGCCTAATGATGATGGCAGAAAATCAAGATCAATTTGTCCTTTCCCACAACAAAGGCCTCAAAAGCAAAGATCTGATTGCAGCCATCTTCAAAGCTGATGTATATGCCTTTGGTATGATACTTCTCGAGCTGCTGACAGGGAAAGTAATTAAAAATGATGGATTTGATCTAGTCAAATGGGTGAATTCAGTGGTCAGAGAGGAATGGACTGTTGAAGTTTTTGACAAGTCCATAATCTCACAAGGTGCTTCTGAAGAGAGGATGATGAATTTGCTGCAGGTAGCATTAAAATGCGTAAATCCTTCTCCAAATGATAGGCCAAGTATGAGCCAAGTTGTAGTGATGACAAATTCTTTGATAGAGGAGGAAGAAAAATCCATATCCTTTGACACATGA 1842 0.411 MANSEEEEVIKALVTFMDKLAPGNVPRDPMWGWNLTSDPCIDKWHGVKCYSDNKYVKSIILQKFNFGGVVDASSLCIAKSLQILSLRDNTLHDSVSEDIGNCKFLTHLLLSGNQLSGDLPVSIGNLSNMKRLQVSDNHFTGELPNMVHVSSLISFFAQNNNFTGEIPSFDFSNLDAFNVSNNNLQGPVPDVKGKFHEDSFSGNPNLCGKPLSNACRPPPPPPPPPEKKDQKSFPNDLSIYSGYLVLGLIVLIFLTFKLLSKFKTKEKALDVEKKEMAQETVGVVGKASEISNSNGSKNGTVIRSECSFTSLESGMTTSGLVLLSSRTLRGLQFEDLLGAPAELIRRGKHGSLYKVMLDNGVLLAVKRIKDWGISKQDFERRMNLIAQVKHPLVLPPVAYYCSQQEKLLAYEYLQNGSLFMLLYGSQSGHSFDWGSRLNVAAKIAEALAYMHEEFLENGIAHGNLKSSNILFDKNMDPCISEYGLMMMAENQDQFVLSHNKGLKSKDLIAAIFKADVYAFGMILLELLTGKVIKNDGFDLVKWVNSVVREEWTVEVFDKSIISQGASEERMMNLLQVALKCVNPSPNDRPSMSQVVVMTNSLIEEEEKSISFDT 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02069 613 SUPERFAMILY L domain-like 25 211 - -
Pumo10g02069 613 ProSiteProfiles Protein kinase domain profile. 338 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g02069 613 Gene3D Phosphorylase Kinase; domain 1 327 412 - -
Pumo10g02069 613 Gene3D Transferase(Phosphotransferase) domain 1 413 612 - -
Pumo10g02069 613 Gene3D Ribonuclease Inhibitor 7 169 IPR032675 -
Pumo10g02069 613 Pfam Protein kinase domain 344 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g02069 613 PANTHER OS05G0588300 PROTEIN 11 601 - -
Pumo10g02069 613 MobiDBLite consensus disorder prediction 207 232 - -
Pumo10g02069 613 MobiDBLite consensus disorder prediction 213 228 - -
Pumo10g02069 613 Gene3D Ribonuclease Inhibitor 170 218 IPR032675 -
Pumo10g02069 613 SUPERFAMILY Protein kinase-like (PK-like) 342 597 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02069 Pumo-Chr10 27820420 27822834 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02069 33 595 Receptor kinase-like Gene Family AT1G48480 34.343 9.95e-93 297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pumo10g02069 Pkinase 7.5e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02069 - - gmx:100787974 1095.88