Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02057 ATGCTAATCTGGAATGTGGCGGTGAAAGGATTGGCACAAAAGGCTTCTTTGTCCAACCAAGGGTCTTCTCAAATGTTAAGGGACACTTGTGAAGTTATAAGAAGAGCAAACACAACACGTTATGGTCTAGCCGCGGGCGTGTTCACAAAGAACTTGGACATGGCAAATGAAATGATGCGAGGACTAAGGGCAGGAACAGTGTGGATTAATTGCTTCAATGTGTTTGATGCTGCAATCCCTTTTGGTGGGTACACAAGATGA 261 0.4444 MLIWNVAVKGLAQKASLSNQGSSQMLRDTCEVIRRANTTRYGLAAGVFTKNLDMANEMMRGLRAGTVWINCFNVFDAAIPFGGYTR 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02057 86 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 27 85 - -
Pumo10g02057 86 SUPERFAMILY ALDH-like 27 84 IPR016161 GO:0016491
Pumo10g02057 86 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 28 78 IPR016163 GO:0016620
Pumo10g02057 86 Pfam Aldehyde dehydrogenase family 27 84 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02057 Pumo-Chr10 27633797 27634923 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02057 28 84 Aldehyde Dehydrogenase Gene Family AT3G48000 77.193 3.65e-27 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02057 K00128 - sind:105157191 102.834