Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02054 ATGGTAAAAGAAGAAACAGCGTCCGGAAAAAAGACTGCGGTGGTTGCCATCTTCGGGCTTCTTCTGCGCCGTAAGAACCACGCGCCTGTGCTCGCGGCGGGTGCGGTTCCGGCGCTTGTGAATGTTTTGGCTTCCTCGGACAATGCTAATCTCGTGACCGATTCGTTAGCGGTTCTCGTGGCGTTGGTGGAGAATGTGGAGGGGGCTTATGCTGTGTTAAGAGCTGAAGCGTTGCCGTTGGTCATAGCGATTTTGCAATCTGCTACTTCGCGCGCAGGGAAGGAGTACTGTGCATCCATTTTGCTGGCGCTGTGTGTTAATGTTGGTGCGGAAGTGACCGGTGTTCTGGCCAAGGAGGCTTCGGTTATGCCTTCGCTTTATTCGCTTCTGACCGATGGTACTCCTCACGCGGCCAAGAAAGCGCGTGCACTCATCAATGTTATATTAGAGTTCAGCCAGAAGCGGTTTTCTGGAACAGTGGGTTCCTCTGTCTCGCGGCAAAGATGGGTTAACTAA 516 0.531 MVKEETASGKKTAVVAIFGLLLRRKNHAPVLAAGAVPALVNVLASSDNANLVTDSLAVLVALVENVEGAYAVLRAEALPLVIAILQSATSRAGKEYCASILLALCVNVGAEVTGVLAKEASVMPSLYSLLTDGTPHAAKKARALINVILEFSQKRFSGTVGSSVSRQRWVN 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02054 171 PANTHER U BOX DOMAIN-CONTAINING 4 146 - -
Pumo10g02054 171 Gene3D - 1 165 IPR011989 -
Pumo10g02054 171 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 34 77 IPR000225 GO:0005515
Pumo10g02054 171 SUPERFAMILY ARM repeat 11 155 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02054 Pumo-Chr10 27620679 27621194 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02054 8 171 U-box Gene Family AT1G10560 42.515 6.88e-33 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02054 - - gmx:100810963 270.781