Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02044 ATGAAGAACTTGAAGTGGCACAAGCAAATTTCCAACAGTGGCAAGTTGGGGAGGAGGCTTTCGCTTGGGGAGTACAACCGTGCAGTGTCATGGTCTAAGTATCTGGTGTCTCCTGGGGCTGAGATAAAGGGAGAAGGAGAAGAGGAATGGAGTGCAGATATGTCTCAGTTGCTCATTGGATCCAAATTTGCCTCTGGTAGACACAGCAGAATCTACAGAGGGGTTTACAAGCAAAAGGATGTGGCAATTAAGCTGATAAGTCAACCGGAGGAGGATGAGGACTTGGCTGCTTTTCTTGAGAAGCAATTCACTTCTGAGGTCTCCTTGCTCCTCAGATTAGGCCACCCAAATATCATTACTTTTATTGCTGCTTGCAAGAAACCACCAGTGTTTTGCATAATTACTGAATATTTGGCTGGAGGTTCACTGGGAAAATTCCTGCATCACCAACATCCAGATATACTTCCTCTCAAACTTGTTCTGAAATTAGCCCTTGACATTGCGCGAGGGATGCAATATCTTCACTCTGAAGGGATTCTTCATAGGGATCTCAAGTCAGAAAATCTCCTTTTGGGGGAAGATATGTGTGTAAAAGTAGCAGATTTTGGTATCTCATGCTTAGAATCTCAGTGTGGCAGTGCAAAAGGATTCACCGGAACTTACCGGTGGATGGCGCCCGAAATGATCAAAGAAAAGCACCATACCAAGAAAGTAGATGTGTATAGTTTTGGCATAGTTCTATGGGAGCTTTTGACAGGAAAGACTCCATTTGACAACATGACACCGGAGCAGGCAGCATTTGCAGTTTCACACAAGAATGCAAGACCACCATTGCCATCTGAGTGTCCTTGGGCATTTAGTGATCTCATCAACAGATGCTGGTCTAGCAACCCTGATAAAAGGCCTCATTTTGATGAGATAGTGTCCATTTTGGAGTACTACACCGAATCACTTCAGCAGGATCCAGAGTTTTTCTCAACTTACAAACCGAGTCCTACTAGTAGTAACACAATTCTGGGGTGCCTCCCTAAATGCAATGCTCGCCATAAATTTGGTGCTTGCAAAGCTTAA 1071 0.4426 MKNLKWHKQISNSGKLGRRLSLGEYNRAVSWSKYLVSPGAEIKGEGEEEWSADMSQLLIGSKFASGRHSRIYRGVYKQKDVAIKLISQPEEDEDLAAFLEKQFTSEVSLLLRLGHPNIITFIAACKKPPVFCIITEYLAGGSLGKFLHHQHPDILPLKLVLKLALDIARGMQYLHSEGILHRDLKSENLLLGEDMCVKVADFGISCLESQCGSAKGFTGTYRWMAPEMIKEKHHTKKVDVYSFGIVLWELLTGKTPFDNMTPEQAAFAVSHKNARPPLPSECPWAFSDLINRCWSSNPDKRPHFDEIVSILEYYTESLQQDPEFFSTYKPSPTSSNTILGCLPKCNARHKFGACKA 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02044 356 PRINTS Tyrosine kinase catalytic domain signature 238 260 IPR001245 GO:0004672|GO:0006468
Pumo10g02044 356 PRINTS Tyrosine kinase catalytic domain signature 173 191 IPR001245 GO:0004672|GO:0006468
Pumo10g02044 356 PRINTS Tyrosine kinase catalytic domain signature 135 148 IPR001245 GO:0004672|GO:0006468
Pumo10g02044 356 PRINTS Tyrosine kinase catalytic domain signature 282 304 IPR001245 GO:0004672|GO:0006468
Pumo10g02044 356 PRINTS Tyrosine kinase catalytic domain signature 219 229 IPR001245 GO:0004672|GO:0006468
Pumo10g02044 356 Gene3D Transferase(Phosphotransferase) domain 1 140 336 - -
Pumo10g02044 356 ProSitePatterns Serine/Threonine protein kinases active-site signature. 179 191 IPR008271 GO:0004672|GO:0006468
Pumo10g02044 356 SMART serkin_6 57 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g02044 356 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 51 312 - -
Pumo10g02044 356 CDD STKc_MAP3K-like 64 311 - -
Pumo10g02044 356 Gene3D Phosphorylase Kinase; domain 1 47 139 - -
Pumo10g02044 356 FunFam Serine/threonine-protein kinase isoform 1 47 139 - -
Pumo10g02044 356 SUPERFAMILY Protein kinase-like (PK-like) 46 311 IPR011009 -
Pumo10g02044 356 ProSiteProfiles Protein kinase domain profile. 57 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g02044 356 Pfam Protein tyrosine and serine/threonine kinase 59 311 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02044 Pumo-Chr10 27424781 27430136 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02044 25 320 MAP Kinase Kinase Kinase AT1G62400 62.000 2.86e-134 386
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Pumo10g02044 PK_Tyr_Ser-Thr 2e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02044 - - gmx:100807757 706.442