Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02026 ATGGAAGAAACATTTGTTCCCTTCCGTGGGATTAAGAATGACCTCAAAGCAAGAATTCCGTGCTACAGACAAGATTGGACCAGTGGATTGCAATCTGGAATCAGGATCCTTGCCCCAACTACATACATATTTTTTGCTTCTGCAATTCCTGTTATTTCTTTTGGGGAGCAACTGGAGAGAAATACTGATGGAGCTCTCACTGCTGTGCAGACTCTTGCATCAACAGCACTCTGTGGTATTATCCACTCAATCATTGGAGGGCAGCCTCTCCTTATACTCGGTGTAGCTGAGCCAACCGTTCTGATGTATACATTCATGTATAACTTCGCTAAGGATCGCAAGGATTTGGGACACGAACTATTCCTACCTTGGACTGGATGGGTGTGTGTTTGGACTGCTCTGTTGCTCTTCTTGCTGGCTATTCTTGGTGCATGCTCCATAATCAATAGATTCACACGCATTGCTGGTGAATTATTTGGTCTGCTAATTGCAATGCTCTTTATGCAGCAGGCTATAAAGGGACTTGTGGAAGAGTTTGGTGTGCCCAAGAATCGGAGAGAAGATGCCAATCAGATTGCACTCCAATCATCCTGGCTGTTTGGCAATGGAATGTTTGCTTTGGTTTTGTCATTTGGTCTTCTTTTTACTGGTCTACAAAGCCGCAAAGCTAGATCCTGGCGTTACGGGACAGGTTGGCTACGGGGATTTATAGCTGATTATGGAGTCCCACTAATGGTTCTTGTATGGACTGGTGTGTCTTACATACCAGTCAATGAGGTTCCAAGGGGAATCCCTAGGCGACTTTTCAGTCCAAACCCATGGTCTCCTGGTGCATACTCAAATTGGACTGTTGTCAAGGAAATGTTGAATGTGCCCGCCATATATATTATTGGAGCATTTATACCAGCAACTATGATTGCTGTGCTTTACTACTTTGATCACAGTGTTGCATCACAACTTGCTCAGCAGAAGGAGTTCAATCTAAGAAAACCCTCATCTTATCATTATGACTTGCTGCTCTTGGGCTTTTTGACCATATTGTGTGGCCTCATTGGAATCCCTCCTTCCAATGGTGTGATTCCACAATCTCCAATGCATACAAAGAGCTTGGCTACTCTAAAACATCAGCTTTTACGGAATAAGCTTGTATCTACTGCACGAAAAAGCATGCGGAGAAATGTTAACTTGAGCCAGTTATACCAAAATATGAAAGAAGCATATGATGAAATGCAGACTCCATTGGTTCCCCAAATGCCACCTACCTTGGGGCTGAAAGAACTGAAGGAATCTACTATTGAACTGGCTTCAAGTCAAGGATATATTGATGCCCCTGTTGATGAGGTTGTCTTTGATGTGAATAAGGATGTTGATGACCTTTTGCCAGTTGAAGTTAAAGAGCAGCGCCTCAGCAATCTACTGCAGGCATTGATGGTTGCGGCTTGTGTTGCTGCTATGCCCATTTTGAAGAAGATACCAACTTCAGTGCTTTGGGGCTACTTTGCCTTCATGGCCATTGAAAGCTTGCCAGGAAATCAATTTTGGGAGAGAATATTGTATCTTTTCACTGCTCCAAGTCGAAGATACAAACTGCTGGAGGAATACCATGCCACCTTTGTTGAGACTGTGCCCTTCAAAACAGTTGCCATGTTTACCGTGTTCCAGACAGTGTACCTGCTTCTCTGCTTTGGCATAACCTGGATACCAATTGCTGGGGTCCTTTTCCCATTGTTAATCATGCTTCTTGTCCCAGTACGGCAATATTGTCTTCCAAAGTTTTTCAAAGGTGCCCATCTTCAAGAGCTGGACGCAGCAGCATATGAGGAAGCACCTGCCATTGCTTTCAACATGTCCTTTGAAGATCCAAGTAGCCAGGCACCAACAGTCAATGTCAGTGGTGCAGAAATTCTTGATGAAGTTATTACAAGGAGTCGTGGAGAGTTTCGCCGCACTCAAAGCCCCAAAACAACAAGTTCAACTCCAACTTCAACAGGAGATATAAGACCAGCCAATAGCCCTCAGTTAGCAAGGAGGATTCCCAGCCCTCGAGTAACTGAATTGAGAGGGGAAAGCAGCCTCAGACCAACTGGGAAGGAGATCAAGTCAATGCAAACACCTAGTCCACGCTCACCAGCTCTTGGAAAAGTTACCAAAGATTCGCCTTCAAGCTAA 2169 0.4444 MEETFVPFRGIKNDLKARIPCYRQDWTSGLQSGIRILAPTTYIFFASAIPVISFGEQLERNTDGALTAVQTLASTALCGIIHSIIGGQPLLILGVAEPTVLMYTFMYNFAKDRKDLGHELFLPWTGWVCVWTALLLFLLAILGACSIINRFTRIAGELFGLLIAMLFMQQAIKGLVEEFGVPKNRREDANQIALQSSWLFGNGMFALVLSFGLLFTGLQSRKARSWRYGTGWLRGFIADYGVPLMVLVWTGVSYIPVNEVPRGIPRRLFSPNPWSPGAYSNWTVVKEMLNVPAIYIIGAFIPATMIAVLYYFDHSVASQLAQQKEFNLRKPSSYHYDLLLLGFLTILCGLIGIPPSNGVIPQSPMHTKSLATLKHQLLRNKLVSTARKSMRRNVNLSQLYQNMKEAYDEMQTPLVPQMPPTLGLKELKESTIELASSQGYIDAPVDEVVFDVNKDVDDLLPVEVKEQRLSNLLQALMVAACVAAMPILKKIPTSVLWGYFAFMAIESLPGNQFWERILYLFTAPSRRYKLLEEYHATFVETVPFKTVAMFTVFQTVYLLLCFGITWIPIAGVLFPLLIMLLVPVRQYCLPKFFKGAHLQELDAAAYEEAPAIAFNMSFEDPSSQAPTVNVSGAEILDEVITRSRGEFRRTQSPKTTSSTPTSTGDIRPANSPQLARRIPSPRVTELRGESSLRPTGKEIKSMQTPSPRSPALGKVTKDSPSS 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02026 722 Gene3D Helical hairpin bin 17 60 - -
Pumo10g02026 722 FunFam probable boron transporter 2 18 60 - -
Pumo10g02026 722 MobiDBLite consensus disorder prediction 644 722 - -
Pumo10g02026 722 MobiDBLite consensus disorder prediction 650 669 - -
Pumo10g02026 722 PANTHER ANION EXCHANGE PROTEIN 2 610 IPR003020 GO:0005452|GO:0006820|GO:0016020
Pumo10g02026 722 MobiDBLite consensus disorder prediction 696 722 - -
Pumo10g02026 722 Pfam HCO3- transporter family 462 552 IPR011531 GO:0006820|GO:0016020
Pumo10g02026 722 Pfam HCO3- transporter family 7 180 IPR011531 GO:0006820|GO:0016020
Pumo10g02026 722 Pfam HCO3- transporter family 204 375 IPR011531 GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02026 Pumo-Chr10 26897503 26903801 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02026 1 697 Antiporters AT3G62270 75.753 0.0 1075
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02026 K24194 - gmx:100793554 1356.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g02026 10 26897503 26903801 Pumo10g02026 10 26897503 26903801 ECH
Pumo4g01418 4 17976156 17982405 Pumo10g02026 10 26897503 26903801 PCT