Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02024 ATGGCCAGAAGTATGTGGGAGTGGGTGAATCAGAGGATCGATGTGCAGGCCTTCTACGAATTCATTGAATCAGAGAACAATCCCAAGGAGGATCCTCTCATGCTTTGGCTTATCGGTGGCCCTGGGGCAGCGGAATACGATTACGGTGAAAACACAAGCGGAAGTGAGAAATGGTCAAATTTGGATAAGTCCATGCCTACTGGTTACTCAGCGTTTTCTGGCCTTGTCATTGAAATAGGCATTCCTATTCCGGTAGTTGTTCAAGAAATTTCACAAGGAAATGAAAAAGGGGTCCAACCAAGGATAAATCTCCAGGGATACTTGCTGGGGAATCCACTAACAACTCGAAGGGAAGGTAACTATAAAATCCCCTTTGCTCATGGAATGGCACTTATTTCTGATGAACTATACGAGTCACTACAAAAAAATTGTAAAGGAGAGTACATAAATGTAGACACCAGAAATGAATTGTGTGCTAGAGATATGGAGTCATTCCATGAGGTTACATCAGGACTTGATACGTCCTATATTTTGGACTCATTTTGTGAGTGGAATGATAGTGAAACTTCTTCGAGGAGATCTCTAATTAAGAAAAATCCAGGGAAGAATTTCCTTAATACTCATCTCAAATTGCCACCCTTAAGCTGTCGGACTTATGTGAACTTCCTGTGTGGTTTTTGGGCAAATGATGATAATGTTCGCAGTGCACTTCATATCCGTAAGGGAAGTATAGGAAAATGGCATCGGTGTACCTTCAATATACCTAACAAGGAGGATATCCCAGGCAGCTTTGAGTATCATGTAAATCTTAGTAGAAAAGGCTATCGTTCACTGATATACAGTGGTGATCATGACTTGAAAGTTCCTTTCTTGGGAACTCAAGCATGGATAAGATCTTTAAACTACTCCATTGTGGATGATTGGAGGGCATGGTATACAAATGGCCAAGTTGCAGGATACACAAGGACTTACTCCAATCCTATGACATTTGCAACTGTGAAGGGTGGAGGCCACACAGTTCCAGAGTACAAGCCTGAAGAATGCTTTGCCATGTATAGTAGTAAGACCACCTACAACAACACCATGAGAATTGAGAAGAAAGTGATTTTGTATGTGGGAGTGGGTGAATCAGAGGATGTGCAGGCCTTCTACTACTTCATTGAGTCAGAGAACAATCCCAAGGAGGATCCTCTCATGCTTTGGCTTACCGGTGGCCCTGGTTGCTCAGCGTTTTCTGGCCTTGTCATTGAAATAGGTCCACTTGCATTTAAACATGAGGAATATGATGGGAGCCTGCCCACTTTCATCTTGAGGCCACAATCATGGACAAAGGTTAGTAGCATTATCTTTGTAGACTTGCCTGTTTCCTCGGGGTTCACTTATGCCAGAACAGAGCTTGCTGCACAACGAAGTGACTGGATGTTAGTTCATCAAGTCCATCAATTTCTTAGGAAGTGGTTGATTGATCATCCAAAGTTTTTGTCGAATGAAGTTTACATTGGTGGTGATTCATACTCAGGCATTCCTATTCCGGTAGTTGTTCAAGAAATTTCACAAGGAAATGAAAAAGGGGTCCAACCTTGGATAAATCTCCAGTATTCTTTCCTTCAAGGATACCTGCTAGGGAATCCAGTAACAACTCGAATTGAAGATAACTATGCAATCCCCTTTGCTCATGGAATGGCACTTATTTCTGATGAACTATACAAGATCTTTCTTATTTCACTACAAAAAAATTGTAAAGGAGAGTACATAAATGTAGACATCAGAAATGTATTGTGTTCTAGAGATATGGAGTCATTCCATGAGGTTACATCAGGACTTAATGAGGCCCATATTTTGGACTCATTTTGTGAGTGGGATGATAGTGAAACTTCTTCAAGGAGATATCTAATTAAGAAAAATGCTGGGAAGAATATCCTAAATACTCAAATGAAATTGCCACCCTTAAGCTGTTGGACTTATGTGAATTTCCTGTGCGGTTTTTGGGCAAATGATGATAATGTTCGCAGTGCACTTCATATCCGTAAGGGAAGTATAGGAAAATGGCATCGGTGTACCTTCAATATACCTAACAAGGAGGATATCCCAGGCAGCTTTGAGTATCATATACACAAGGACTTACTCCAATCGTATGACATTTGCAACTGTGAAGGCAAGTCTCTTGTTCTCCTTATTCAAGATAGGTGA 2190 0.4105 MARSMWEWVNQRIDVQAFYEFIESENNPKEDPLMLWLIGGPGAAEYDYGENTSGSEKWSNLDKSMPTGYSAFSGLVIEIGIPIPVVVQEISQGNEKGVQPRINLQGYLLGNPLTTRREGNYKIPFAHGMALISDELYESLQKNCKGEYINVDTRNELCARDMESFHEVTSGLDTSYILDSFCEWNDSETSSRRSLIKKNPGKNFLNTHLKLPPLSCRTYVNFLCGFWANDDNVRSALHIRKGSIGKWHRCTFNIPNKEDIPGSFEYHVNLSRKGYRSLIYSGDHDLKVPFLGTQAWIRSLNYSIVDDWRAWYTNGQVAGYTRTYSNPMTFATVKGGGHTVPEYKPEECFAMYSSKTTYNNTMRIEKKVILYVGVGESEDVQAFYYFIESENNPKEDPLMLWLTGGPGCSAFSGLVIEIGPLAFKHEEYDGSLPTFILRPQSWTKVSSIIFVDLPVSSGFTYARTELAAQRSDWMLVHQVHQFLRKWLIDHPKFLSNEVYIGGDSYSGIPIPVVVQEISQGNEKGVQPWINLQYSFLQGYLLGNPVTTRIEDNYAIPFAHGMALISDELYKIFLISLQKNCKGEYINVDIRNVLCSRDMESFHEVTSGLNEAHILDSFCEWDDSETSSRRYLIKKNAGKNILNTQMKLPPLSCWTYVNFLCGFWANDDNVRSALHIRKGSIGKWHRCTFNIPNKEDIPGSFEYHIHKDLLQSYDICNCEGKSLVLLIQDR 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02024 729 Gene3D alpha/beta hydrolase 2 49 IPR029058 -
Pumo10g02024 729 FunFam Serine carboxypeptidase-like 19 365 624 - -
Pumo10g02024 729 Gene3D alpha/beta hydrolase 358 720 IPR029058 -
Pumo10g02024 729 PRINTS Carboxypeptidase C serine protease (S10) family signature 438 450 IPR001563 GO:0004185|GO:0006508
Pumo10g02024 729 PRINTS Carboxypeptidase C serine protease (S10) family signature 451 461 IPR001563 GO:0004185|GO:0006508
Pumo10g02024 729 PRINTS Carboxypeptidase C serine protease (S10) family signature 486 511 IPR001563 GO:0004185|GO:0006508
Pumo10g02024 729 FunFam Carboxypeptidase 215 360 - -
Pumo10g02024 729 Pfam Serine carboxypeptidase 371 713 IPR001563 GO:0004185|GO:0006508
Pumo10g02024 729 Pfam Serine carboxypeptidase 11 43 IPR001563 GO:0004185|GO:0006508
Pumo10g02024 729 Pfam Serine carboxypeptidase 80 354 IPR001563 GO:0004185|GO:0006508
Pumo10g02024 729 FunFam Carboxypeptidase 264 357 - -
Pumo10g02024 729 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 371 703 IPR001563 GO:0004185|GO:0006508
Pumo10g02024 729 SUPERFAMILY alpha/beta-Hydrolases 371 702 IPR029058 -
Pumo10g02024 729 Gene3D - 222 357 - -
Pumo10g02024 729 Gene3D alpha/beta hydrolase 57 193 IPR029058 -
Pumo10g02024 729 SUPERFAMILY alpha/beta-Hydrolases 9 354 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02024 Pumo-Chr10 26693866 26837885 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02024 659 708 Calmodulin-binding Proteins AT2G22960 52.000 3.06e-10 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02024 K16296 - sly:101252581 607.06