Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02020 ATGCAGAGCGTGGCTTTCACTTTCTCTCCCTCTCTTTCTCTCCGCAACCCTTCTTCCCTCAACTCGTGGAGGCGCCAACTCACTCTCCGTTCCTTCGCCAAACCGAACAACAACAACAACAACAACAACGAAGGCGTTAACTCCAATGGCGTCTCTTCCACTTCCTTCGATCGCCGATCTTGGACTCTCTCTCCTTCCTCTTCCTTCAAGTTCCGCCCCCTCCCTTCCCCTCCCTGCGCCGCGGAAAACGCCGTTCCCGAAAGCGCCCCCGTCGAGAACTCGCTCTTCAAAACTCTCGAACTCGGCGCCTTGTTTGGCCTCTGGTACCTCTTCAACATCTACTTCAATATCTACAACAAACAGGTGTTGAAGGCGTTTCATTATCCTGTAACTGTGACTGTTGTTCAATTTGCTGTCGGGACTGTGCTTGTGGCCTTAATGTGGGGTTTGAATCTCTACAAGAGACCGAAACTCAGTGGTGCTATGCTTGGAGCAATTTTGCCGCTGGCTGCGGTGCATACTTTGGGGAATCTTTTCACTAATATGAGTCTTGGGAAGGTGGCTGTGTCTTTCACTCACACGATCAAGGCCATGGAGCCTTTCTTTTCAGTGATCCTTTCTGCCATGTTCCTTGGAGAGTTTCCTACACCGTGGGTGGTTGGTTCCCTTGTGCCTATTGTTGGTGGAGTTGCACTGGCGTCTGTTACCGAGGCCTCTTTCAATTGGGCTGGATTTTGGAGTGCAATGGCATCCAATGTGACAAATCAATCTCGTAATGTTCTTAGCAAAAAGGCCATGGTTAAGAAAGAGGATTCTATGGACAACATTACTCTCTTCTCCATAATAACAGTGATGTCCTTCTTCTTGTTAGCACCTGTGGCTGTCTTCATGGAGGGTGTCAAATTTACCCCTGCTTACTTGCAATCTGCTGGGTTAAATGTTAGACAACTTTACATCAGATCACTTCTTGCTGCACTCTGTTTCCATGCGTATCAACAAGTTTCTTATATGATATTGCAAAGGGTATCACCTGTTACCCACTCTGTGGGCAATTGTGTGAAGCGGGTTGTGGTCATTGTGAGCTCTGTCATCTTCTTCCAAACACCTGTCTCACCTGTGAATGCTTTTGGGACTGCTATAGCTCTTGCTGGCGTTTTCCTCTATTCAAGGGTGAAGCGTATCAAGGCAAAGCCAAAAACAGCTTAA 1206 0.4784 MQSVAFTFSPSLSLRNPSSLNSWRRQLTLRSFAKPNNNNNNNNEGVNSNGVSSTSFDRRSWTLSPSSSFKFRPLPSPPCAAENAVPESAPVENSLFKTLELGALFGLWYLFNIYFNIYNKQVLKAFHYPVTVTVVQFAVGTVLVALMWGLNLYKRPKLSGAMLGAILPLAAVHTLGNLFTNMSLGKVAVSFTHTIKAMEPFFSVILSAMFLGEFPTPWVVGSLVPIVGGVALASVTEASFNWAGFWSAMASNVTNQSRNVLSKKAMVKKEDSMDNITLFSIITVMSFFLLAPVAVFMEGVKFTPAYLQSAGLNVRQLYIRSLLAALCFHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVIFFQTPVSPVNAFGTAIALAGVFLYSRVKRIKAKPKTA 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02020 401 PANTHER SOLUTE CARRIER FAMILY 35 100 395 - -
Pumo10g02020 401 Pfam Triose-phosphate Transporter family 100 389 IPR004853 -
Pumo10g02020 401 SUPERFAMILY Multidrug resistance efflux transporter EmrE 146 235 - -
Pumo10g02020 401 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 99 399 IPR004696 GO:0016020|GO:0022857|GO:0055085
Pumo10g02020 401 MobiDBLite consensus disorder prediction 33 53 - -
Pumo10g02020 401 SUPERFAMILY Multidrug resistance efflux transporter EmrE 313 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02020 Pumo-Chr10 26656381 26660845 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02020 1 401 Antiporters AT5G33320 70.433 0.0 530
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02020 K15283 - gmx:100804563 691.034