Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01945 ATGGCTGGGAAAACTAACTTTTTTCTCTTTTCACTCTTTTTCTTCTTAATTTCCATCAACGCGAAGCTTGATCTCTACCCTTCAGATTACAAGGCACTCTTAACTCTGCAGAAGGACCTCGGAGTCAACGGTCAACTCGAGGAGGCAACTGAGGCGTGCGAAACGGAGGGCGTGTTCTGCGAGCGAAGGCTCTCCGGCAAGGAAACCTACGCGCTCCGAATCACCAGACTCGTGTTCAAATCGAAGCAGTTAAATGGTGTGTTGTCCCCCGCCATAGGACGCCTCACAGAGCTCAAAGAACTCTCTCTCTCCGACAACCAACTCGTTGACCGAGTCCCTCCCCAAATCGTTGACTGCAGAAAGCTCGAAATCCTCGACCTCGCCAACAACCAATTCTCCGGTGAAGTCCCTTCGGAATTGTCCTCTCTCACGCGCCTCCGCGTGCTGGACATCTCCTCCAACAGACTCTCCGGCAACCTCAATTTCCTCAAATACTTTCCTAATTTGGAAACTCTCTCCGTCGCCGACAACCTCTTCACCGGAAGAGTCCCTCCTTCCGTCCGCTCCTTCCGCAACCTCCGCCACTTCAACTTCTCCGGTAACCGCTTCCTCGAACCTTCTTCTCTCAGGTTCCAACAACAATCATCCTCGTCCGACACCACTCTCTCCAGACGTTTTCTCTTAGACGATGTTGCTCCTGCTCCTGCACCTACCTCACCACACAAGAAAAAATCTAATGGTTCTTCTCATGCTGCTGCTGCTGCACCTGGTCCTGCACCTCACCTTAATAAGAAGCACAAGCACAGTAAGAGAAAACTTGCAGGGTGGATTCTCGGGTTCGTGGCAGGGGCACTGGCTGGGACCTTATCAGGATTCGTCTTTTCTCTATTGTTCAAACTCGCTCTGGCGTTGATCAAAGGACGAGGAAGGAAAGCCGGCCCTGATATATACAGTCCCTTGATTAAGAAAGCAGAGGATTTGTCTTTTTTGGAGAATGAAGAAGGAATTGCTTCGTTGGAAATCATCGGACGCGGTGGCTGTGGAGAGGTCTACAAGGCGGAGTTGCCAGGAAGCAACGGGAAAATGATCGCTATAAAGAAAATCGTTCAGCCTCCCAAAGACGGTGCTGAATTAGCAGAGGAAGACAGCAAGGGTCTGAACAAGAAAATGAGGCAAATTCGATCGGAGATCAACACTGTGGGCCAAATTAGACACCGAAACCTTCTGCCTCTGCTCGCGCACGTGTCTAGGCCGGACTGCCACTACCTTGTGTACGAGTTCATGAAGAATGGGAGCCTCCAGGACATTCTGAGCAAGGTCGAGAGGGGAGAGGGCGAGTTGGATTGGTTGTCAAGGCACAAGATTGCGCTCGGTGTCGCCGCTGGACTTGAATACCTTCACATGAGTCACAACCCGCGAATCATTCATAGGGATCTCAAGCCTGCTAATATTCTTCTTGATGATGACATGGAGGCGCGCATAGCTGATTTTGGGCTCGCGAAGGCAATGCCGGATTACAAGACTCACATAACAACCTCCAATGTGGCTGGCACTGTGGGGTATATTGCTCCAGAGTATCATCAGATACTCAAGTTCACTGATAAGTGTGATATTTTCAGCTTTGGGGTTATACTTGGGGTGTTGGTGATTGGGAAGCTTCCTTCTGATGAGTTCTTCCAGAACACTGAAGAGATGAGTCTGGTCAAGTGGATGAGGAAGGTCTTGAGTTCTGAGAATCCGAAAGAGGCAATTGATACAAAGCTGCTGGGGAATGGGTTTGAGGAGCAGATGCTTCTGGTTTTGAAGATTGCATGCTTCTGCACCATGGATGATCCCAAGGAGAGGCCTAACAGTAAGGATGTTAGGTGCATGCTGTCACAGATTAAGCACTGA 1893 0.4987 MAGKTNFFLFSLFFFLISINAKLDLYPSDYKALLTLQKDLGVNGQLEEATEACETEGVFCERRLSGKETYALRITRLVFKSKQLNGVLSPAIGRLTELKELSLSDNQLVDRVPPQIVDCRKLEILDLANNQFSGEVPSELSSLTRLRVLDISSNRLSGNLNFLKYFPNLETLSVADNLFTGRVPPSVRSFRNLRHFNFSGNRFLEPSSLRFQQQSSSSDTTLSRRFLLDDVAPAPAPTSPHKKKSNGSSHAAAAAPGPAPHLNKKHKHSKRKLAGWILGFVAGALAGTLSGFVFSLLFKLALALIKGRGRKAGPDIYSPLIKKAEDLSFLENEEGIASLEIIGRGGCGEVYKAELPGSNGKMIAIKKIVQPPKDGAELAEEDSKGLNKKMRQIRSEINTVGQIRHRNLLPLLAHVSRPDCHYLVYEFMKNGSLQDILSKVERGEGELDWLSRHKIALGVAAGLEYLHMSHNPRIIHRDLKPANILLDDDMEARIADFGLAKAMPDYKTHITTSNVAGTVGYIAPEYHQILKFTDKCDIFSFGVILGVLVIGKLPSDEFFQNTEEMSLVKWMRKVLSSENPKEAIDTKLLGNGFEEQMLLVLKIACFCTMDDPKERPNSKDVRCMLSQIKH 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01945 630 MobiDBLite consensus disorder prediction 233 266 - -
Pumo10g01945 630 Pfam Leucine rich repeat 97 156 IPR001611 GO:0005515
Pumo10g01945 630 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 73 629 - -
Pumo10g01945 630 SUPERFAMILY Protein kinase-like (PK-like) 332 625 IPR011009 -
Pumo10g01945 630 Gene3D Phosphorylase Kinase; domain 1 324 427 - -
Pumo10g01945 630 Gene3D Transferase(Phosphotransferase) domain 1 428 630 - -
Pumo10g01945 630 ProSiteProfiles Protein kinase domain profile. 336 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g01945 630 FunFam leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1 323 427 - -
Pumo10g01945 630 FunFam Leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1 29 140 - -
Pumo10g01945 630 Coils Coil 376 396 - -
Pumo10g01945 630 FunFam Leucine-rich repeat receptor-like protein kinase 428 630 - -
Pumo10g01945 630 SUPERFAMILY L domain-like 71 207 - -
Pumo10g01945 630 SMART serkin_6 336 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g01945 630 Gene3D Ribonuclease Inhibitor 26 241 IPR032675 -
Pumo10g01945 630 Pfam Protein kinase domain 339 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g01945 630 FunFam Leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1 141 227 - -
Pumo10g01945 630 ProSitePatterns Serine/Threonine protein kinases active-site signature. 474 486 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01945 Pumo-Chr10 25649471 25651967 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01945 2 630 Receptor kinase-like Gene Family AT2G31880 64.441 0.0 824
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-2 Pumo10g01945 Pkinase 4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01945 - - gmx:100811980 1087.4