Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01896 ATGGGTTTTCATGACTTGGTTTTGCTATTCTGTTCAGCTTGGTATGTCTTTTATGTGGGTAGTTGCAGTGCTCAGTTGCAATCCTCTCAGACCCAAGTGCTTCTCCAGTTGAAAAAGCACTTGGAGTACCCAAAACAATTGGAAATTTGGAGAGATCGTTGGACAGATCTTTGCTCTATTTCTTCTTCTGGGCAAGTGAATGTCACATGCAAGGACAATTTTGTCACTGAGCTCACCATCTTGGGTGATAAGCCAACCAAGGGTAGAGATTTTGATGGGTTTGCCATTCCAAATCAAACACTATCAGAGAGCTTCTCCATGGACTCTTTTGTGGCTACTCTGGCAAGGTTAACCAGCCTGAGAGTCCTTAGTCTTGTCTCTTTGGGCATGTGGGGACCACTCCCTGATAGAATTCACAGACTCTATGCACTTGAACATTTGGACTTGAGTTCCAATTATCTTTATGGATCAATCCCTCCAAAGATTTGCACAATGGTGAACCTTCAAACTCTTAGATTGGGTGATAACTTCTTCAATGGTACCATCCCAAGCTTGTTCAATTCATCAAGCAATCTCACAGTTCTTAGTTTGAGGAATAACAAGTTGAAGGGTCTATTTCCACCTTCAATCCTTAGTGTCACCACTTTAACTGACATTGACATGTCAAGCAATCAAATATCAGGGAGATTGCAAGATTTTAGTGTTTTGAGTAGCTTGGAACAGCTAGATTTAGGAGAAAACAGATTAGAGTCTGCACTACCTGCAATGCCAAAAGGGTTGATAAGGCTTCTCCTCAGCAGAAACTCCTTCTCAGGTGAAATTCCCAAGCACTATGGTCAATTAAATAGGCTTGAGAAGCTTGATGTTTCCTTCAATGCACTCACAGGCACTGCTCCTGCTGAACTTTTTTCTTTGCCAAACATCAGTTACTTGAATTTGGCATCCAACATGTTGAATGGACCACTCAAAAATCACCTAAGATGTAGCAGCCAACTTAGATTTGTTGACATATCATACAATAGATTTGTGGGGGACTTGCCTTCTTCTCTGAGTACTAAATCAGAAAATAGAGTTGTTAAGAGTGATGGAAACTGTTTATCTGGGAGTGTGCAGCATCAGCATGCAGTATCCTACTGTACAGAAGCTCGTGTGAAGAAGAAATCATACAGAGTTGGAATTTTTGTTGGTCTCATTGTGGGAATTCTTGCAATCATTGTGGTTTTGGCTTTGATCATTGTTATAACTTGTAAAAGGTATTTCCCTTGGGGGGTGTCAGAGCAGCATCTATTGCATAAAACAGTTCAAGATAGCAGCTATGCAGCAGGGTTCTCCTCCGAGCTTGTCACAAATGCAAGGTATGTTTCTGCAGCTGCAAAGTTAGGCAGAGAGGACCTCCCCACATGTCGGTCATATTCCTTGGAAGAGCTAAAGGAAGCCACAAATAACTTTGACAACTCTACTTTTATGGGTGAAAATATATATGGGAAGCTTTACAGAGGAAAATTGGAGAGTGGAATACAGGTTGTAATAAGGTCCCTGCCTTTGTCAAAAAAGTATTCAATTAGGAATTTCAAACTGAGGTTGGATTTGCTTGCAAAGCTGCGTCACCCTCATTTGGTATCCCTCCTGGGGCACTGCATTGATGGTGTTGTAGGAGAGAATAATGAGGCAAATGTCTTCCTCATTTATGAAGATGTGTCAAATGGGACTTTTCAGACTTATCTCTCTGGAGATAGTCCAGGCAAGGTTTTCAATTGGTCAGAGCGATTGTCAGCACTAATTAGCATTGCTAAGGCTGTCCACTTCCTACACACTGGCATGATACCTGGTTTCTTCAAAAATCGACTTAAGACTAACAATATCTTGCTGAATGAAAATTGGATGGCAAAGTTGAGTGACTATGGATTGTCCATTATATCAGAAGAAACTGATGCATGTGGGGTAAAAGGAGAAAGTCCTGATTCATGGCAAATGAAAATGTTAGAGGATGATGTTTATAGCTTTGGATTCATACTACTCGAGGCACTTGTTGGACCTTCATTATCAGCTAAAAGAGAAGCAAATGTGCTGAATGTAATGGCATCTTTCAATAGTCAGGATGGTTGGAAACAGATTGTGGACCCAGTTGTGCAAGCTACATGCTCCAAAGAATCTCTATTAGTTGCGATTTCCATAACAAACAAATGTATATCTTCTGAGTCATGGAGCAGACCATGCATTGAGGATGTCCTTTGGAACCTTCAGTATGCTTCTCAAATTCAGGCAACAGCTGATGGAGATCAGAGAATTTGA 2292 0.4101 MGFHDLVLLFCSAWYVFYVGSCSAQLQSSQTQVLLQLKKHLEYPKQLEIWRDRWTDLCSISSSGQVNVTCKDNFVTELTILGDKPTKGRDFDGFAIPNQTLSESFSMDSFVATLARLTSLRVLSLVSLGMWGPLPDRIHRLYALEHLDLSSNYLYGSIPPKICTMVNLQTLRLGDNFFNGTIPSLFNSSSNLTVLSLRNNKLKGLFPPSILSVTTLTDIDMSSNQISGRLQDFSVLSSLEQLDLGENRLESALPAMPKGLIRLLLSRNSFSGEIPKHYGQLNRLEKLDVSFNALTGTAPAELFSLPNISYLNLASNMLNGPLKNHLRCSSQLRFVDISYNRFVGDLPSSLSTKSENRVVKSDGNCLSGSVQHQHAVSYCTEARVKKKSYRVGIFVGLIVGILAIIVVLALIIVITCKRYFPWGVSEQHLLHKTVQDSSYAAGFSSELVTNARYVSAAAKLGREDLPTCRSYSLEELKEATNNFDNSTFMGENIYGKLYRGKLESGIQVVIRSLPLSKKYSIRNFKLRLDLLAKLRHPHLVSLLGHCIDGVVGENNEANVFLIYEDVSNGTFQTYLSGDSPGKVFNWSERLSALISIAKAVHFLHTGMIPGFFKNRLKTNNILLNENWMAKLSDYGLSIISEETDACGVKGESPDSWQMKMLEDDVYSFGFILLEALVGPSLSAKREANVLNVMASFNSQDGWKQIVDPVVQATCSKESLLVAISITNKCISSESWSRPCIEDVLWNLQYASQIQATADGDQRI 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01896 763 Gene3D Transferase(Phosphotransferase) domain 1 566 762 - -
Pumo10g01896 763 Gene3D Ribonuclease Inhibitor 27 260 IPR032675 -
Pumo10g01896 763 ProSiteProfiles Protein kinase domain profile. 483 750 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g01896 763 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 260 384 - -
Pumo10g01896 763 SUPERFAMILY L domain-like 29 371 - -
Pumo10g01896 763 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 446 565 - -
Pumo10g01896 763 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 87 372 - -
Pumo10g01896 763 SUPERFAMILY Protein kinase-like (PK-like) 466 748 IPR011009 -
Pumo10g01896 763 Gene3D Phosphorylase Kinase; domain 1 448 564 - -
Pumo10g01896 763 SMART LRR_typ_2 141 165 IPR003591 -
Pumo10g01896 763 SMART LRR_typ_2 281 305 IPR003591 -
Pumo10g01896 763 SMART LRR_typ_2 236 259 IPR003591 -
Pumo10g01896 763 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 27 258 - -
Pumo10g01896 763 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 566 763 - -
Pumo10g01896 763 Pfam Protein tyrosine and serine/threonine kinase 489 682 IPR001245 GO:0004672|GO:0006468
Pumo10g01896 763 Gene3D Ribonuclease Inhibitor 261 393 IPR032675 -
Pumo10g01896 763 Pfam Leucine rich repeat 167 226 IPR001611 GO:0005515
Pumo10g01896 763 Pfam Leucine rich repeat 283 342 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01896 Pumo-Chr10 25034037 25038537 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01896 6 695 Miscellaneous Gene Families AT5G14210 50.570 0.0 645
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Pumo10g01896 PK_Tyr_Ser-Thr 4.6e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01896 - - gmx:100802978 1353.58