Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01871 ATGGAATGTAATAAAGATGGCGCCTTAAGGGCTAAAAAACTCGCAGAGAAGATGCTTTTACAGAGGGACTTTGGTGGGGCAAGAATGCTCGCAAAGAAGGCTCTAGAATTATATCCAAATCTTGATGGTCTTCCTCAACTTCTAGCAACTATTGAGGTGTATATCTCTTCTGAAAAAAGAGTTAATGGAGAAGTTGATTGGTACATGATCCTTGGTGTGCAGCCCTCGGCTGATGAAGAAACAATTCGACGACGATATAGGAAACTGGCTCTTACGCTGCACCCTGATAAAAATAGATCCGTAGGTGCAGATGGGGCATTTAACCTTATCTCACAGGCTTGGAGTTTATTATCTGATAAAGCCAAGAGAATCACTTATGACCACAAGTGCAATTTATGGGGTATATATCATGGAAATCCTGGTGGGAAACCTTCTATGCCAGCTAGTCAGAATGGTTTACATAGTAATGTCTTCAATCCTGTGTTGTTGAAACCCACATTTTGGACCATTTGCAGTTTCTGCAACACAAAGTTTGAGTACCATAATGTTTATATTAACAACAATCTTGTCTGTACCTGCTGTAATAAGCCATTTTTGGCTTCCGAGACATCACCTCCTCCTGGATACAGAAATGTTTCATCCAATCTGATGAAGCAACATAACTTCAACTCAACGAGAATGGAAAGAAATTATCATGTTTCAGGAAGGACACCAATGTCTGCTGTCAATTCATCACTTGGGTCAGGTGCTTTCTCTATGCCTGACGGTATTTCTCGTGTACCGATATCAACTTCTAGTGCTGCAGAAGCTCCTGGTGTTTTTTGGATGTCATCTGAGAATTTGAAGAGAAAGCATGAAGATTCGACACCTGACTTGAGGGGGGATGCCCATTTTGGGAAAGCTCATGCTGTTGAGAGAACTGGTGCCGGTTCAGCTTTTCAGTCCTCTTGTTTCGGTTCAAATTCTATTATGAAAAGAGACAGGCCAAGGAAAAAAAGGCCCACTGATGAACATAAAGTTGGTAGTGATAGAAGAGATATGGAAAACAAAACAGCATCTCAAAATGAAGGAATAAACTTGGCTAATGAATTTGGGTCAGGAAGGGTTAATGCTGCCGGAAATTACAAACGCAATGGTGCTAGGGACGGATCACAACTTCAAATAAAGAACATATTGGCGGAAAAGGCTCGGAAGGAGATTCTTAAAAAGCTTGATGAATGGAATGCATCTTCTGCATCAAAGAATTTAGACAAGTCAAAGAATACTGACACAGAAATCAGAGAGAAGGGCAAAGAAAGGGCAATAAATGGTGTAAAACCTGCTGCACAAGAATTTGTCAATTCTGAGACCATTGGCAAGAAGTGTTTCTCTGCTGATCCAGAGCCAGAGCTGCCTGGTTCTCTCTTAATGAATGTTCCAGACCCAGATTTCCATGATTTTGATGGAGACCGTATTGAAAATGCTTTTGGTAAGAACCAGGTGTGGGCTGCATATGATAATGATGATGGCATGCCGCGCTACTATTGCTTAATCCATGATGTAATCTCGAAGAATCCTTTGAATATGAGGATTAGCTGGTTGAATGCCAAAAGCAATGATGAATTGGCCCCAATAAAGTGGGTCAGTTCTGGCTTTCCTAAGACCAGCGGAGATTTCAGAATAGGAAAGCGTGTATCCTATAGCACTCTTAATTCCTTCTCGCACAGGGTTAAGTGGACAAAAGGTTCAAGAGGGGTTGTCCATATATATCCGAAGAAAGGCGACGTATGGGCTCTGTATCGGAACTGGTCCCTTGACTGGAATGAATTTACTGATGATGAAATCATACAGAAATATGACATGGTGGAGGTGCTTGAAGACTACAGTGAAGGGCAAGGTGTGAATATTGCCCCACTTGTCAAGGTTGCAGGTTTCAAGACAGTATTCCACCAGAATGTCGACCCAAGAAAAGCCAGGAATATTTCAAAGGAGGAGATGTTTCGTTTCTCACACCAGGTACCTTCATACTTGCTTACTGGTGAAGAGGGTCACAATGCTCCTAAAGGTTGCTTGGAGCTTGATCCTGCTGCTACTCCAATGGAACTTCTTCAGGTGTTAGCTGAAGATCTGGAGCAAGAAATTGTAATGACAACTGAAAAATCTGTGGAAGATGAATTGAAGCACAAAGAGAATTCCAGGGAGGAGGGTTCGATCAAGAAGTGCCAGACAACTAAGGAAGAAGGTTCTGATGAAGGATTGGGAGAGAAGAAAAGTAAGCCTGAGATTTTGTTTGTATATAAGCGGAGACGTCTAGGGGAAAAGAGAGCTGTGAAGTGTTAA 2319 0.4191 MECNKDGALRAKKLAEKMLLQRDFGGARMLAKKALELYPNLDGLPQLLATIEVYISSEKRVNGEVDWYMILGVQPSADEETIRRRYRKLALTLHPDKNRSVGADGAFNLISQAWSLLSDKAKRITYDHKCNLWGIYHGNPGGKPSMPASQNGLHSNVFNPVLLKPTFWTICSFCNTKFEYHNVYINNNLVCTCCNKPFLASETSPPPGYRNVSSNLMKQHNFNSTRMERNYHVSGRTPMSAVNSSLGSGAFSMPDGISRVPISTSSAAEAPGVFWMSSENLKRKHEDSTPDLRGDAHFGKAHAVERTGAGSAFQSSCFGSNSIMKRDRPRKKRPTDEHKVGSDRRDMENKTASQNEGINLANEFGSGRVNAAGNYKRNGARDGSQLQIKNILAEKARKEILKKLDEWNASSASKNLDKSKNTDTEIREKGKERAINGVKPAAQEFVNSETIGKKCFSADPEPELPGSLLMNVPDPDFHDFDGDRIENAFGKNQVWAAYDNDDGMPRYYCLIHDVISKNPLNMRISWLNAKSNDELAPIKWVSSGFPKTSGDFRIGKRVSYSTLNSFSHRVKWTKGSRGVVHIYPKKGDVWALYRNWSLDWNEFTDDEIIQKYDMVEVLEDYSEGQGVNIAPLVKVAGFKTVFHQNVDPRKARNISKEEMFRFSHQVPSYLLTGEEGHNAPKGCLELDPAATPMELLQVLAEDLEQEIVMTTEKSVEDELKHKENSREEGSIKKCQTTKEEGSDEGLGEKKSKPEILFVYKRRRLGEKRAVKC 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01871 772 PANTHER BNAC03G44070D PROTEIN 1 692 - -
Pumo10g01871 772 MobiDBLite consensus disorder prediction 315 361 - -
Pumo10g01871 772 SUPERFAMILY Chaperone J-domain 63 145 IPR036869 -
Pumo10g01871 772 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Pumo10g01871 772 MobiDBLite consensus disorder prediction 329 351 - -
Pumo10g01871 772 Coils Coil 693 713 - -
Pumo10g01871 772 SMART dnaj_3 65 122 IPR001623 -
Pumo10g01871 772 PRINTS DnaJ domain signature 68 86 IPR001623 -
Pumo10g01871 772 PRINTS DnaJ domain signature 86 101 IPR001623 -
Pumo10g01871 772 PRINTS DnaJ domain signature 102 122 IPR001623 -
Pumo10g01871 772 Gene3D DnaJ domain 54 134 IPR036869 -
Pumo10g01871 772 Pfam Domain of unknown function (DUF3444) 470 675 IPR024593 -
Pumo10g01871 772 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Pumo10g01871 772 MobiDBLite consensus disorder prediction 714 749 - -
Pumo10g01871 772 Pfam DnaJ domain 66 127 IPR001623 -
Pumo10g01871 772 CDD DnaJ 66 119 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01871 Pumo-Chr10 24728683 24732821 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01871 4 207 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 34.762 3.13e-27 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01871 - - gmx:100788095 1362.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01871 10 24728683 24732821 Pumo10g01871 10 24728683 24732821 ECH