Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01862 ATGGAGAAACAGCATGTGATGCTCCCTACTTCATCTACATCATCTACTCCTTTTTCATCTGATTTTAAAGTTGATTATAATTCTACTGTTCATGTTGAGGATGAGGTTTTAAGAACTCAAAGGATGGCCATATCAGCGCAGAACGAAAGAGACAGAGAGATAAAGCAGCATAGATATGTATTTCAAACAAAGAGTCCGGTTGATGTTCTGGACGATGGGTACCAGTGGAGGAAATATGGGAAAAAGATAGTGAAAAACAATAAATTCCCAAGAAGTTACTACAGGTGCTCTCATCGAGATTGCAATGTCAAGAAACAAATCCAACGCCATTCCCAAGATGAACAGATTGTGGTGACAACCTACGAAGGGATACATACACACCCTGTCGATAAGTCAGCGGAAAGCTTCGACCAAATCTTGGGAAACCTACTCATAAGCAACCTAGCATGTAATGTGCCTCCCACATTGGAGGAATAG 477 0.4088 MEKQHVMLPTSSTSSTPFSSDFKVDYNSTVHVEDEVLRTQRMAISAQNERDREIKQHRYVFQTKSPVDVLDDGYQWRKYGKKIVKNNKFPRSYYRCSHRDCNVKKQIQRHSQDEQIVVTTYEGIHTHPVDKSAESFDQILGNLLISNLACNVPPTLEE 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01862 158 Pfam WRKY DNA -binding domain 71 128 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo10g01862 158 FunFam WRKY transcription factor 57 56 130 - -
Pumo10g01862 158 SMART WRKY_cls 70 129 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo10g01862 158 Gene3D WRKY domain 57 123 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pumo10g01862 158 SUPERFAMILY WRKY DNA-binding domain 63 129 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pumo10g01862 158 ProSiteProfiles WRKY domain profile. 65 130 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo10g01862 158 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 28 132 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01862 Pumo-Chr10 24626113 24627298 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01862 58 145 WRKY Transcription Factor Family AT5G13080 65.909 1.91e-43 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pumo10g01862 WRKY 2e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01862 - - gmx:100796070 289.656