Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01855 ATGTGCTATCAGATCCTCATTCATTTCTCTCGCCTCAACACTTCCCGTGCTCAGCATTATTCAGACATGTCTAGCATTGAACTTAACGTGAAGCAAGGAGAACCAACCCGAATTCAGCCTGCAGAGGAAACAGAGAATAAGGGACTCTACTTCCTTTCAAACCTCGACCAGAACATTGCTGTTCCAGTGCGCACGGTTTATTGCTTCAAATCTGCTTCTAGAGGAAACGAGGATGCTGCACGAGTTATCAAGGATGCCCTGTCGAAGATTCTTGTCCCTTATTACCCCATGGCAGGCACGTTGATCATAAGCCCCGAAGGGAAGTTGATAGTGGATAACCCTGGGGAGGGTGCAGTGTTTGTTGAGGCTGAAGCAAATTGTGACATTGAAGAGATTGGGGACTTGACAAAGCCTGACCCTGATACTCTTGGGAAACTGGTCTACAATGTCCCTGGTGCAAGAAACATTCTTGAGATGCCTCTTATGACTGTTCAGGTGACAAAGTTCAAATGCGGAGGATTTACACTGGGGCTATGCATGATCCACTGCATGAAAGATGGACTATGTGCCATGGAGTTTGTGAATGCATGGAGTGAGACAGCCCGAGGTTTGGACTTGAAGATTCCACCATTTCTCGATCGAACCATAATCAAAGCACGTGACCCTCCCAAGATAGAGTTCCAACACAACGAATTTGCGGAAATAGAAGACATATCAAACACCAAAAAGCTTTATGAGGAAGAAACCATGCTCTACAGATCCTTCTGTTTCGACCCTGAGAAGCTTGACATGCTCAAGAAAAAGGCCACGGAAGATGGGGTTTTGGAAAAGTGCTCCACTTTTGAAGCACTCTCGGGTTTTGTATGGAGGGCTCGAACTGCAGCATTGAGGATGCAACCTGATCAAGAAACGAAGCTTTTGTTTGCAGTCGATGGAAGATCAAGATTTGTGCCTCCAATACCAGAAGGGTACTTTGGCAATGCTATTGTGTTGACAAATTCGTTGTGTAAGGCTGGGGAGTTATTGAAGAACCCTTTGTCATTTTCTGTGGGGTTGGTTCGTGAGGCTATTGAAATGGTCACTAATAGTTATATGAGATCTGCTATTGACTATTTTGAAGTCACAAGGGCTAGGCCTTCTCTAACAGCTACCCTTTTGATCACAACTTGGACCAAGTTGTCTTTTCACACCACAGATTTTGGATGGGGAGAACCTCTTTGTTCTGGCCCTGTGACCCTGCCAGAGAAAGAGGTCATTTTGTTCTTATCAAATGGTCAAGAAAGGAAAAGCATAAATGTTCTTCTGGGTTTGCCTAGTTCTGCTATGGAAATTTTTGAAGAATTGGTGATGCAGGTGTGA 1359 0.4474 MCYQILIHFSRLNTSRAQHYSDMSSIELNVKQGEPTRIQPAEETENKGLYFLSNLDQNIAVPVRTVYCFKSASRGNEDAARVIKDALSKILVPYYPMAGTLIISPEGKLIVDNPGEGAVFVEAEANCDIEEIGDLTKPDPDTLGKLVYNVPGARNILEMPLMTVQVTKFKCGGFTLGLCMIHCMKDGLCAMEFVNAWSETARGLDLKIPPFLDRTIIKARDPPKIEFQHNEFAEIEDISNTKKLYEEETMLYRSFCFDPEKLDMLKKKATEDGVLEKCSTFEALSGFVWRARTAALRMQPDQETKLLFAVDGRSRFVPPIPEGYFGNAIVLTNSLCKAGELLKNPLSFSVGLVREAIEMVTNSYMRSAIDYFEVTRARPSLTATLLITTWTKLSFHTTDFGWGEPLCSGPVTLPEKEVILFLSNGQERKSINVLLGLPSSAMEIFEELVMQV 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01855 452 FunFam Spermidine hydroxycinnamoyl transferase 28 232 - -
Pumo10g01855 452 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 38 448 - -
Pumo10g01855 452 FunFam Tryptamine hydroxycinnamoyl transferase 236 450 - -
Pumo10g01855 452 Gene3D - 24 233 IPR023213 -
Pumo10g01855 452 Pfam Transferase family 33 447 - -
Pumo10g01855 452 Gene3D - 234 452 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01855 Pumo-Chr10 24473857 24476582 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01855 26 452 Monolignol Biosynthesis Gene Families AT5G48930 36.036 6.53e-92 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01855 K15400 - gmx:100794490 822.387