Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01854 ATGGGCCTTGTAAAGGGAAAGTGGAAGCAAAACATGATTTTCAAGGCGTGGGAGCGTTGCCGATTATTTTCAAAGCCACACTTGAAATTAAAAGCAACTCTGTCAGAGAATGATGATGATGAGAAGAAGGGTCATCAAATAGCACCTCATGGTTGTTTTTCAGTGCATGTTGGACCAGAGAGACAAAGGTTCATTGTGAAGACCAAGTACGTTAACCACCCACTCTTTCAGATGCTGCTAGAAGAGGCAGAACAGGAATATGGGTTCGAGAGTGATGGCCCCATTTGGCTTCCTTGCAACGTCGATTTGTTCTACGAAGTGTTGGCTGAGATGGATGGCGAAGAGAATAATAATAACAACATCATTTTCCACGGTTCTCGAAGATGCTTCATTACCATGGCTAAGGTTTTTCCCTTCTTCGTTCTTCGCAGCCCGGCACGTCTTCTTTGTCACATGAACAAGGGTCATAGTGCATACAGCGTTATGGATTCGGAATTGCTCAGAATAAACCGATTTCATTAG 522 0.4368 MGLVKGKWKQNMIFKAWERCRLFSKPHLKLKATLSENDDDEKKGHQIAPHGCFSVHVGPERQRFIVKTKYVNHPLFQMLLEEAEQEYGFESDGPIWLPCNVDLFYEVLAEMDGEENNNNNIIFHGSRRCFITMAKVFPFFVLRSPARLLCHMNKGHSAYSVMDSELLRINRFH 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01854 173 Pfam Auxin responsive protein 32 109 IPR003676 GO:0009733
Pumo10g01854 173 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 36 106 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01854 Pumo-Chr10 24459700 24460290 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01854 49 109 Calmodulin-binding Proteins AT4G34750 47.541 3.04e-17 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01854 K14488 - gmx:100793967 315.079