Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01841 ATGAAAGATTCAGCGGAAACAGAGCCTATTAGTGATTCCCTGAACCTGCTGAGTTCTCTCCTGGACTCGGAGCTCCCGAGCGTGAGAAACTTCAAAGGGAAATGGTCACTCGCCCGAGTCAAACTCACCCAACTCCAAACCCACCTCACCGATTTCTCCGCCGAGTTCCCCAACGCCTCCACCTCAAACTCCCTCTCCCTTCACTTACTCCACTCCATCTCCCAAACCCTCAACGACGCCGTTTCGCTCTCCCGCACGTGCCAGCCCCCGGACCTCCCCAACGGGAAGCTCAAAACCCAAAGCGACCTCGACTCCCTCCTCGCCACCCTCGACCGCCACGTCACCGACTGCGACATCCTCTTCCGCAGCGGCCTCCTCCTCGAAAGCGCCGCCGTCTCTTCTTCCTCCTCGAAGCGCGAGGCCATCCGCTCCGCATCGAGAAACCTAATAACCCGTCTCCAAATCGGGTCGCCCGAGTCCAAATCCTCCGCGATGGACTCCTTATTGGGCCTTCTCCACGAAGACGACAAAAACGTGACCATAGCAGTGGCCCAGGGTGTGGTCCCCGTGCTCGTGCGCCTACTCGATTCCCCCTCCGACATGAAGGAGAAGACCGTCGCCGCCATCTCCAAAGTCTCCACCGTGGAAAGCGCCAAGAGCGTGCTCCTCGCTGAGGGCTTGCTCCTTCTCAACCACTTGCTTAGGGTCTTAGATTCCGGAAGCGGATTTTCTATTGAGAAAGCATGCATCGCGCTTCAGGCGCTGAGTCTGACAAAGGATAATGCTAGGGCGATTGGCTCGCGCGGCGGAATCTCGTCGCTGCTGGAGATTTGCCAGGCTGGCACCCCCGGCGCGCAGGCCTCCGCCGCCGCAGTGCTGCGGAACCTCGCCGCGTTCGCGGAAATCAGGGACAATTTCGCGGAGGAGAACGCGGTGGGGGTGCTGATTGCGTTGGCCTCCTCCGGGACCGCGGCGGCGCGCGAGAACGCGGTTGGTTGTTTGTCGAATTTGATTAATTCGGAGGGTTTGTCGAATTTGAGGGTTATGGTGGTTAAAGAAGGCGGGGTTGAGTGTTTGAAGAATTACTGGGATTCAGTCACACCAATTCAGAGTCTTGAAGTTGCGGTGGAGATGTTGCGGCATTTGGCCGGAAGTGGTCCAATTGGGGAAGTTCTTGTGGGTGAAGGGTTTGTTCAGAGGCTCGTTGGGGTTTTGAATTGCGAGGTTTTGGCGGTGAGGATTGCGGCGGCGAGGGCTGTTTACGCTTTAGGATTGAACAGTGGGAGGGCGAGGAAGGAGATGGGGGAATTGGGTTGCGTTTTGGGTTTGATCAAGATGTTGGATGGGAAGGGTGTGGAGGAGAAAGAGGCTTCAGCGATGTCATTGTCGGTGCTGCTGATGCACCCAGCGAATCGCAGGGTGTTCCGCAAGGATGAAAGAGGGGTTGTGAGTGCGGTTCATCTCTTGAACCCTTCGTTGCAGGGGTTGGATAAGAAGTACCCTGTTTCGTTACTCGCTTCACTAGTTCATTCCAAGAGTTGCAGAAAGCAAATGGTAGCAGCTGGGGCTTGTGTATATACGCAGAAGCTTGTGGAAATGGATGTTCCCGGCTCAAAGAAACTCTTGGAGAGCCTCGGGCGTGGTAAGATTTGGGGTGTTTTTGCTAGACCCTAG 1674 0.5633 MKDSAETEPISDSLNLLSSLLDSELPSVRNFKGKWSLARVKLTQLQTHLTDFSAEFPNASTSNSLSLHLLHSISQTLNDAVSLSRTCQPPDLPNGKLKTQSDLDSLLATLDRHVTDCDILFRSGLLLESAAVSSSSSKREAIRSASRNLITRLQIGSPESKSSAMDSLLGLLHEDDKNVTIAVAQGVVPVLVRLLDSPSDMKEKTVAAISKVSTVESAKSVLLAEGLLLLNHLLRVLDSGSGFSIEKACIALQALSLTKDNARAIGSRGGISSLLEICQAGTPGAQASAAAVLRNLAAFAEIRDNFAEENAVGVLIALASSGTAAARENAVGCLSNLINSEGLSNLRVMVVKEGGVECLKNYWDSVTPIQSLEVAVEMLRHLAGSGPIGEVLVGEGFVQRLVGVLNCEVLAVRIAAARAVYALGLNSGRARKEMGELGCVLGLIKMLDGKGVEEKEASAMSLSVLLMHPANRRVFRKDERGVVSAVHLLNPSLQGLDKKYPVSLLASLVHSKSCRKQMVAAGACVYTQKLVEMDVPGSKKLLESLGRGKIWGVFARP 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01841 557 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 186 227 IPR000225 GO:0005515
Pumo10g01841 557 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 14 555 - -
Pumo10g01841 557 Gene3D - 135 366 IPR011989 -
Pumo10g01841 557 SUPERFAMILY ARM repeat 148 489 IPR016024 -
Pumo10g01841 557 Gene3D - 367 543 IPR011989 -
Pumo10g01841 557 SMART arm_5 258 298 IPR000225 GO:0005515
Pumo10g01841 557 SMART arm_5 385 425 IPR000225 GO:0005515
Pumo10g01841 557 SMART arm_5 299 339 IPR000225 GO:0005515
Pumo10g01841 557 SMART arm_5 175 214 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01841 Pumo-Chr10 24274523 24276720 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01841 227 429 U-box Gene Family AT2G23140 31.220 4.96e-12 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01841 - - gmx:100794077 882.093