Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01835 ATGAAGTGGCCAACATGGAAGTCCAAGTCCAACACCATGGCAATGGCTGTGGTGTTGCTTCATCTGAGTTTTTCCTTGGAGGTGTTCTGTCACCCTTCTCATGCAGACTCAATTGCTGCGCTTCCTGGCCAACCCCACGTAGGCTTTCAACAGTTCTCAGGATATGTCACAGTGGATGACAAGAAACACAAGTCTCTCTTTTACTATTTTGCTGAGTCAGAAACTGATCCAGCTTCAAAGCCTCTTGTTCTGTGGCTCAATGGAGGACCTGGTTGTTCTTCTCTGGGAGTGGGAGCATTCTCAGAAAATGGACCCTTCAGACCAAATGGAGAATTTCTGATTAAAAATTATTATAGTTGGAATAAAGAGGCAAACATGCTGTATTTGGAGACACCAGTTGGAGTGGGGTTCTCTTATGCTAAAGGTAGCTCCTCCTATATGACAGTGAATGACGAGGCAACAGCCAGGGACAACCTTGTATTCCTGCTACGCTGGTTCAACAAGTTCCCTCAATACAGGAGCAGAGATTTGTTTCTAACTGGGGAAAGCTATGCAGGTCATTATGTTCCTCAACTTGCAAAGCTCATGATTGAAATGAACGCAAAGAACAAGATATTCAATCTGAAAGGCATTGCCTTGGGTAATCCAGTTCTAGAATATGCCACTGACTTCAATTCAAGGGCTGAGTTCTTCTGGTCTCATGGACTAATATCAGATTCAACGTACAACATGTTCACCAAAGTGTGTAACTACTCTAGGTACGTGAGTGAGTACTATAGGGACTCAATTTCGCCTCTTTGTTCAAAGGTTATGGGCCAAGTGAGCAGAGAAACCAGTAAATTTGTAGACAAATATGATGTCACACTTGATGTTTGCATTTCCTCAGTGCTATCACAATCCAAGGTTATTTGTCCTCAAACCCAAGAAGCAAATGAAAGCATAGACGTGTGTGTAGATGACAAGGTTACAAACTACTTAAACCGGAGAGATGTACAAGAGGCACTTCATGCAAAGCTCGTTGGAGTTCGCAAGTGGGATGTTTGCAGCAACATACTGGACTATGATATGCTCAACCTGGAAGTGCCTACACTCCCTGTTGTTGGATCACTGATAAAAGCTGGAGTTAAGGTCTTAATTTACAGTGGAGATCAAGATTCAGTAATTCCACTGACTGGAAGCCGTACCTTAGTTCAGAAGTTGGCAAGACAATTAGGACTGAATACAACAGTCCCTTACAGAGTATGGTTTGAAGGCCTGCAGGTTGGAGGGTGGACTCAAGTATATGGCAATATCCTCTCATTTGCCACTGTCAGAGGTGCCTCTCATGAAGCCCCTTTCTCACAACCTGAAAGATCTCTTGTGCTATTCAAGTCATTCTTGGAAGGCAGGCCTTTACCTGATGCTTTCTGA 1410 0.4362 MKWPTWKSKSNTMAMAVVLLHLSFSLEVFCHPSHADSIAALPGQPHVGFQQFSGYVTVDDKKHKSLFYYFAESETDPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGEFLIKNYYSWNKEANMLYLETPVGVGFSYAKGSSSYMTVNDEATARDNLVFLLRWFNKFPQYRSRDLFLTGESYAGHYVPQLAKLMIEMNAKNKIFNLKGIALGNPVLEYATDFNSRAEFFWSHGLISDSTYNMFTKVCNYSRYVSEYYRDSISPLCSKVMGQVSRETSKFVDKYDVTLDVCISSVLSQSKVICPQTQEANESIDVCVDDKVTNYLNRRDVQEALHAKLVGVRKWDVCSNILDYDMLNLEVPTLPVVGSLIKAGVKVLIYSGDQDSVIPLTGSRTLVQKLARQLGLNTTVPYRVWFEGLQVGGWTQVYGNILSFATVRGASHEAPFSQPERSLVLFKSFLEGRPLPDAF 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01835 469 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 38 449 IPR001563 GO:0004185|GO:0006508
Pumo10g01835 469 SUPERFAMILY alpha/beta-Hydrolases 41 466 IPR029058 -
Pumo10g01835 469 ProSitePatterns Serine carboxypeptidases, histidine active site. 432 449 IPR033124 GO:0004185
Pumo10g01835 469 Gene3D - 363 462 - -
Pumo10g01835 469 ProSitePatterns Serine carboxypeptidases, serine active site. 179 186 IPR018202 GO:0004185
Pumo10g01835 469 FunFam Carboxypeptidase 363 462 - -
Pumo10g01835 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 165 190 IPR001563 GO:0004185|GO:0006508
Pumo10g01835 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 116 128 IPR001563 GO:0004185|GO:0006508
Pumo10g01835 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 432 445 IPR001563 GO:0004185|GO:0006508
Pumo10g01835 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 129 139 IPR001563 GO:0004185|GO:0006508
Pumo10g01835 469 Gene3D alpha/beta hydrolase 33 294 IPR029058 -
Pumo10g01835 469 Pfam Serine carboxypeptidase 43 462 IPR001563 GO:0004185|GO:0006508
Pumo10g01835 469 FunFam Carboxypeptidase 31 466 - -
Pumo10g01835 469 Gene3D - 317 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01835 Pumo-Chr10 24134865 24138300 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01835 325 465 Calmodulin-binding Proteins AT2G22960 28.369 6.32e-16 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01835 K16297 - gmx:100795668 936.021