Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01834 ATGGCCAGAGAGCAGCAAAAGCAGGATCCCCCTTTGCAAAACCAAAACCAGGAATTGCAGCAGGGTAAAGGTGAAGTGGAAAAGGAGGAGGAGGCTGAAACCCCTTTGACTCTCAGCGTTACTTCAAAGGTTTTGTACATGTTGGGAGACATCACAGCAGGGCCTGCATCTATGTTCGCTCAATGGCTCCAATTAGTTCGTAAACGCACTTCCAACTGTCGCACCTCTGGCTTCCCTCACCGTTCTTTCAGCATGCCTTCTAGCCCGGGAGAATCTATTGAGGATGCAAAGAATGATCAGCCAACAGAAATTAGTTTGTGGGAGAGGCTTGGTAAAGCTGAAATGTTGGACATTGAGTCGACATCATTTTCTTGGGACAGACTCTCTTCACTTCACCACACTGAACACACTAGCAGCAATGAACATTCTGAGGATGAAATGAACCGTGTTCTTGAGGTAACAGTAAATTCCGGAGGGGTAGTCTTCTTTGCCTTTTTCAATGGTCTTGGGAGTGACGATGCTTCTCCAAAAGAAGCAGCCGCTGTTATAAAGATATCATCTTCAAGAATGGCAACACAATCTGAACGTCTTGGTTATGAATTTGCCAAGTGGTTGGGAGTCCAAACTCCGCAGGCTAGAGTCATCCACAATACAAGTTTAGAGTGGATCCAAATAAAGGAAGCTACAGAAAAAGCAAGGGATGCTGCAAGTTCTGCAGGTGATGAAATTGGTGAAATGACATGCACAGAACTTTTGGAAGCACTTGAACTTAGCCGATGTCTCATGTTTATGAGTTACGTGCATGGTTCACCTTTGCTTGAAAGCTCTAGAGCATTTGAATCACAGGAATATGCAGAACGAACATCAGCAGCCCTCGGCAGGATAATGTTGCTGGACCTTGTCATCAGAAATGAAGATAGGCTCCCTTGCCGGCAGCTTAGATGGCGTGGGAACTCCGCAAATTTGTTATTGGCTGAAAAGGTAATCTCAAGTACAGACACAACCGGAGAAACTCCTGATTCTGCAATGAACAAATATCGACCAAGAGTGAGTAGGGCACTTAAAAAAGAAAAAAGGTCAACTTCAGTAGATAGTACATTGAATTCTCATAATTCTGGACTGGTATCACAAGGCTCTGGGCTTTCTGACATGAGTTTTAAAAGTCAAATGTCGATAGAATCAATGCTTACTGACTTCATTGTGGCCATTGATTCTGGCGTTCCTCGTCGACCCCCTGCTGGAAAACGTGCAGATGATCAGGTTAATTATCCCAAGTTGGTCGAGTTACTACTCAATAGCTCAGAGTTTTCCTCTAACCTGTTACATGATATAACCGGAGGGAGACTAGGATGTCCTCATCCAGAAGACACAAATACAATCACTGACGTTCATACTACTACTGATGTAACATCAGTAGTTCATGAGTTCCGTAGTGGTTTTCGTGCTGCTCTCAGGGATCTGCAGGGATTCCATATATTCCTACTCACACTGCATCAAAAACTTGATAATTTGTTAAGATCATTTATGAATGCTATAGGCAAAATATCATCAGGGGAGTCTGAAAAAGAGGATGCAGTGGTTCCTGACTCACCTTCACCTGCTGTTGTTGGTAGTTGTCCCTCTCCATCTAATAAGGAAAGGCTTTCTATTGATATCCATCAAGATTGTAGTGATTCAGAATCTCAGAGAACTGCTCCAAGGGCATCATCATCTTCAGGCAGTAGAGATTGCTGTGACTCTGCTTCTTCTGTGTCAAGAGAAGGTTGGCATGGAAAACACACTAAAGGAAGCGCGGAGTCACTTCGTGGTCTCCGCTTGACAGCTAAGCTCCGTGACTTACATAAATTTGCCAAGGTTGACTCAGAATCCAGTAAAGAATTGGAACAGTGGAATGAAATGCTTAAAAATGATGCGGTCAAGTTATGTTTGGAGAACAATTTTAACACAGGATTTTTCGAGGGTAGTGATAACAACATTGTTGTTGATGCATATGAACTGAAGGTCAGACTTGAGCATATCCTTGAGAGGATTGCATTGATATCTGAGGCTGCAAATACAGAGAGACCATCTGCGGTTACAAATAGTCTATTCATTGGTGGAGCACTAGCTGCAAGATCTACATACACACTGCAACGCTTGGGAATCACACATATTTTATGTTTGTGTACAAATGAAATTGGCCAATCAGATTCTCAATTTCCTGATCTATTCACGTACAAAAATTTCTCTGTGTGTGACAATGAAGATTCTAACATCAGCAGCATATTTGAAGAGGCCTGTGATTTTATAGACTATGTTGAGCAAGCTGGTCAGAGTGTTTTAGTTCATTGCTTCGAGGGGAAAAGCAGAAGTGCCACTTTAGTCCTTGCTTACCTGATGCTTAGGAAGAAATTCACTTTGTTAGAAGCATGGAATGCTCTAAAACGAGTTCATCGCCGATCTCAGCCGAACGATGGTTTTGCAAAGATCTTACTTGAACTGGACCAGAAACTGCACGGGAAGGTTTCAATGGAGTGGCAGAAGCGGAAACCAATGATGAAAATTTGCCCCATCTGTGGCAAGAATGCTGGACTAAGCAGTAGCTCGCTTAAACTCCATCTTCAGAAATCACACAAAAAGCTGTCATCAGGGAGCGTAGATAGTGCCATGACAATGGAGATCCAGAAGGCATTAACAACTTTGAAGATTAGCCGTGGTGGGAGTGTCAGTCCCAAACAGAGGCAGTCATTCAATGATAGATGCATAGATTTCTCTTGCAAATATTAA 2766 0.4295 MAREQQKQDPPLQNQNQELQQGKGEVEKEEEAETPLTLSVTSKVLYMLGDITAGPASMFAQWLQLVRKRTSNCRTSGFPHRSFSMPSSPGESIEDAKNDQPTEISLWERLGKAEMLDIESTSFSWDRLSSLHHTEHTSSNEHSEDEMNRVLEVTVNSGGVVFFAFFNGLGSDDASPKEAAAVIKISSSRMATQSERLGYEFAKWLGVQTPQARVIHNTSLEWIQIKEATEKARDAASSAGDEIGEMTCTELLEALELSRCLMFMSYVHGSPLLESSRAFESQEYAERTSAALGRIMLLDLVIRNEDRLPCRQLRWRGNSANLLLAEKVISSTDTTGETPDSAMNKYRPRVSRALKKEKRSTSVDSTLNSHNSGLVSQGSGLSDMSFKSQMSIESMLTDFIVAIDSGVPRRPPAGKRADDQVNYPKLVELLLNSSEFSSNLLHDITGGRLGCPHPEDTNTITDVHTTTDVTSVVHEFRSGFRAALRDLQGFHIFLLTLHQKLDNLLRSFMNAIGKISSGESEKEDAVVPDSPSPAVVGSCPSPSNKERLSIDIHQDCSDSESQRTAPRASSSSGSRDCCDSASSVSREGWHGKHTKGSAESLRGLRLTAKLRDLHKFAKVDSESSKELEQWNEMLKNDAVKLCLENNFNTGFFEGSDNNIVVDAYELKVRLEHILERIALISEAANTERPSAVTNSLFIGGALAARSTYTLQRLGITHILCLCTNEIGQSDSQFPDLFTYKNFSVCDNEDSNISSIFEEACDFIDYVEQAGQSVLVHCFEGKSRSATLVLAYLMLRKKFTLLEAWNALKRVHRRSQPNDGFAKILLELDQKLHGKVSMEWQKRKPMMKICPICGKNAGLSSSSLKLHLQKSHKKLSSGSVDSAMTMEIQKALTTLKISRGGSVSPKQRQSFNDRCIDFSCKY 921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01834 921 MobiDBLite consensus disorder prediction 77 98 - -
Pumo10g01834 921 ProSiteProfiles Dual specificity protein phosphatase domain profile. 688 833 IPR020422 GO:0006470|GO:0008138
Pumo10g01834 921 FunFam Dual specificity protein phosphatase PHS1 660 834 - -
Pumo10g01834 921 Gene3D - 271 411 IPR036940 -
Pumo10g01834 921 MobiDBLite consensus disorder prediction 364 380 - -
Pumo10g01834 921 MobiDBLite consensus disorder prediction 518 596 - -
Pumo10g01834 921 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 688 833 IPR029021 -
Pumo10g01834 921 Gene3D Protein tyrosine phosphatase superfamily 671 843 IPR029021 -
Pumo10g01834 921 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 757 809 IPR000387 GO:0016311|GO:0016791
Pumo10g01834 921 CDD DSP 689 826 - -
Pumo10g01834 921 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 19 909 IPR035010 GO:0004721|GO:0009737|GO:0043622
Pumo10g01834 921 MobiDBLite consensus disorder prediction 561 581 - -
Pumo10g01834 921 MobiDBLite consensus disorder prediction 77 95 - -
Pumo10g01834 921 Coils Coil 12 32 - -
Pumo10g01834 921 MobiDBLite consensus disorder prediction 332 380 - -
Pumo10g01834 921 ProSitePatterns Tyrosine specific protein phosphatases active site. 775 785 IPR016130 GO:0016311|GO:0016791
Pumo10g01834 921 MobiDBLite consensus disorder prediction 7 21 - -
Pumo10g01834 921 SUPERFAMILY Protein kinase-like (PK-like) 61 420 IPR011009 -
Pumo10g01834 921 Pfam Actin-fragmin kinase, catalytic 103 378 IPR015275 -
Pumo10g01834 921 SMART dsp_5 688 830 IPR020422 GO:0006470|GO:0008138
Pumo10g01834 921 Pfam Dual specificity phosphatase, catalytic domain 702 829 IPR000340 GO:0008138|GO:0016311
Pumo10g01834 921 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01834 Pumo-Chr10 24125137 24131886 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01834 16 899 Protein tyrosine phosphatase (PTP) family AT5G23720 63.366 0.0 1097
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01834 K14165 - gmx:102661225 1557.35