Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01790 ATGTCAAATTCGAAGGCTGGGACAAGCGCTGTCGCACCGGAGCCGGCGTGGGTTCTCCCACGCCGAACCAAGAGCCTGACGGAAGAGTACACGTTGGACGAAGAAAAACTGGGAGAGGGTCAGTTGGGGATCACGTTCCGGTGCACGCACAAGGTGACGGGACGCACCTTCGCGTGCAAGTCAATCCGGAAGCGGAAGCTGGTGTGCAAAAAGGATTACGATGCCGTTCGGAGGGAGGTTCAGATAATGCACCACTTGTCGGAGAACCCGAACGTGGTGAGAATTCACGACACCTATGAGGACACTTCGTGCGTTTACCTGATCATGGAGCTCTGCGAGGGTGGCGAGTTGTTCGATAGGATCAAACAGAAGGGGCGCTACGGCGAGAGAGAGGCCGCGGATTTGATTAAGAAGATTGTTCTGATCATCCGGGATTGTCATTCCGGCGGCGTCTTTCACAGAGACATCAAACCAGAGAACCTTTTGTTCGACATTCTTGGGGAAGATGCTAAGCTCAAAATCACTGATTTCGGTTTGTCTGTTTTTTATAAGCCAGGTGAAATCTTTTGTGACGCTGTTGGAAGCCCATACTATGTTGCACCAGAGGTCTTGCATAAGCATTATGGACCTGAAGCAGACATGTGGAGCGCTGGTGTTATTTTGTACATCTTATTAAGCGGGGTGCCACCATTTTGGGCTGAAACCAATCAGGGGATTTTCCGACAGATTTTGCTAGGAAGACTTGATTTCCAGTCTGAGCCATGGCCTAGCATTTCAGACAGTGGCCAAGGATCTAATTCAGAAAATGCTTGA 813 0.5031 MSNSKAGTSAVAPEPAWVLPRRTKSLTEEYTLDEEKLGEGQLGITFRCTHKVTGRTFACKSIRKRKLVCKKDYDAVRREVQIMHHLSENPNVVRIHDTYEDTSCVYLIMELCEGGELFDRIKQKGRYGEREAADLIKKIVLIIRDCHSGGVFHRDIKPENLLFDILGEDAKLKITDFGLSVFYKPGEIFCDAVGSPYYVAPEVLHKHYGPEADMWSAGVILYILLSGVPPFWAETNQGIFRQILLGRLDFQSEPWPSISDSGQGSNSENA 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01790 270 FunFam Calcium-dependent protein kinase 1 33 116 - -
Pumo10g01790 270 FunFam Maternal embryonic leucine zipper kinase 21 261 - -
Pumo10g01790 270 Gene3D Transferase(Phosphotransferase) domain 1 117 264 - -
Pumo10g01790 270 Pfam Protein kinase domain 34 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g01790 270 PANTHER SERINE/THREONINE-PROTEIN KINASE 23 261 - -
Pumo10g01790 270 CDD STKc_CAMK 30 261 - -
Pumo10g01790 270 Gene3D Phosphorylase Kinase; domain 1 32 116 - -
Pumo10g01790 270 ProSiteProfiles Protein kinase domain profile. 31 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g01790 270 SUPERFAMILY Protein kinase-like (PK-like) 34 260 IPR011009 -
Pumo10g01790 270 SMART serkin_6 31 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g01790 270 ProSitePatterns Serine/Threonine protein kinases active-site signature. 151 163 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01790 Pumo-Chr10 23562704 23566465 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01790 10 263 EF-hand Containing Proteins AT5G23580 66.142 1.11e-120 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pumo10g01790 Pkinase 3.2e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01790 K13412 - gmx:100805961 419.853