Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01785 ATGGAACCGTGGGGTGCTTATCATCGAGTCATGTTCATTGGTCGGGATGAAGAAGATGGAACTCCTTCTGATACTTCTAAGGGAGAGGAATCAAACGATGATGAAGAAAAAATCATTAAAACTGAACCTGTCTTTGTGCCAGAAATTAAGAAAAGGAAACGCCTTAGCCTTAGTCAGCTAAAAGAGGCAAAAGCGGAGTCATGTGGGAAGCAAAGCAGTAGCAAGCATAAGAAAAAGAAGCATGATAGTAGGGATAGATGGTCAGCTGAGAGGTATCAATTGGCCGAGCAAAACATGTGGGAGGTGCTAAAGGCTGAAGGGGCGACATTTGAAAACCCAATAACCCGACCTGCACTAAGATTGGCTGCCCGCAAACACATTGGAGATACTGGACTTTTAGACCACTTACTGAAGCACATTGATGGTAAAGTGGCACCTGGAGGGACTGAGCGATTTCGTAGATGGTTCAACACCAATGGAATCATGGAGTATTGGTTGGAGAGTGCTGACTTGGACAAGGTGCGCCAGGAGGCAGGGGTGCAGGACCCTTACTGGATACCACCATCTACATATAGGGCAGGCAGTGCCCCCTCTCAGAATACTGATTCTTCTGGTGAATTGAAACAACTTAAAATAGAATTGGCGCAAATGAAGAAAGATATGCAGGAGCTCATTGCCAAGAAGGAAGAGAAAAGTGATACTAATATGATGGAGGAGACACACAAGGAATTTGTGAAGTGGAAAGTTATGACTGACCATCGCCTTACTGAAATCATGACTTCTTTGAAGTATGTGCAGGGAAAGTATGGTGAATTGGAGATTTGGAAAACTAAAGTTGAGCAACAACTTGTGGAAATAACTAATAAATTGAATGATCTTCAAGCATCTAGGGAGTGCACCACTTTTAGTCCTCCATCAGAAAGGTGGAAAGATTGGATAGAAAGCACCAACCTAGAAAATATTCAGGAAGATGCATTTGCAACTTGGATTGGGAATCCAGAGCTACTTAATGTTCCAGAAGAGGTTATACTTGAAGATCCCAACACAGCCATACCAACACAGCCACCTAATGAAGAACTGACTAACAAGAGGAGTGATGTGCCGGAGTTGGTACCTGGTAAACTAGAAGACCAACCTAATGTGACCCCTGATTCTTCTACAACTGTTAATTCAAAGTCAGACCTTGACAACTCATTGATTATGTTTCAGGAGATGTTTATGGATTTATACAAATGGAAAGAAAAAATGGAACAGCAGCTGATGGAGGTATCAAATACTGTATATGGTATGCTGGCATTGAAGTAG 1305 0.4245 MEPWGAYHRVMFIGRDEEDGTPSDTSKGEESNDDEEKIIKTEPVFVPEIKKRKRLSLSQLKEAKAESCGKQSSSKHKKKKHDSRDRWSAERYQLAEQNMWEVLKAEGATFENPITRPALRLAARKHIGDTGLLDHLLKHIDGKVAPGGTERFRRWFNTNGIMEYWLESADLDKVRQEAGVQDPYWIPPSTYRAGSAPSQNTDSSGELKQLKIELAQMKKDMQELIAKKEEKSDTNMMEETHKEFVKWKVMTDHRLTEIMTSLKYVQGKYGELEIWKTKVEQQLVEITNKLNDLQASRECTTFSPPSERWKDWIESTNLENIQEDAFATWIGNPELLNVPEEVILEDPNTAIPTQPPNEELTNKRSDVPELVPGKLEDQPNVTPDSSTTVNSKSDLDNSLIMFQEMFMDLYKWKEKMEQQLMEVSNTVYGMLALK 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01785 434 Coils Coil 276 296 - -
Pumo10g01785 434 MobiDBLite consensus disorder prediction 11 43 - -
Pumo10g01785 434 MobiDBLite consensus disorder prediction 60 88 - -
Pumo10g01785 434 MobiDBLite consensus disorder prediction 1 43 - -
Pumo10g01785 434 PANTHER PROTEIN DYAD 2 431 IPR044221 GO:0007131|GO:0051177|GO:0051321
Pumo10g01785 434 Coils Coil 200 234 - -
Pumo10g01785 434 MobiDBLite consensus disorder prediction 369 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01785 Pumo-Chr10 23516934 23520275 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01785 72 167 PHD Transcription Factor Family AT5G22260 38.776 2.18e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01785 - - gmx:100806484 780.785