Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01784 ATGCCAAAGTATATTCAAGGTGAAGAAGAGGCGAAAAAAGCACCAAAGGGGCAATTCGTTGTTTATGTGGGGGAAGAACTAAGAAGATTTACCTTACCACTATCTTATTTGAAGAACCCTATCTTTCAGCAACTGTTGAAGAAATCCGCAGAGGAATACGGATATAGTGACTCAAGAGGCATAGTCCTTCCATGTGATGAATCAACCTTTGAAAGCTTCATAAATTCCAAGCTCAGGATATGA 243 0.3951 MPKYIQGEEEAKKAPKGQFVVYVGEELRRFTLPLSYLKNPIFQQLLKKSAEEYGYSDSRGIVLPCDESTFESFINSKLRI 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01784 80 Pfam Auxin responsive protein 10 75 IPR003676 GO:0009733
Pumo10g01784 80 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 13 72 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01784 Pumo-Chr10 23508681 23508923 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01784 6 74 Calmodulin-binding Proteins AT5G20810 43.478 2.25e-16 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01784 K14488 - cic:CICLE_v10026926mg 105.531