Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01783 ATGTCGAGTTTCCACGTCGGCGGCAAGGTCGTGGACCGAGTCGATTTGCTGAGGAAGAAGCAATGGCCGTGGCGCCTCGACGTTTGGCCCTTCGCTATTCTATACGGCGCCTGGGTTTCCGCGATTCTCCCCAGCCTCGACTTCGTCGACGCCGCGATTATTTTCGGCGCGCTCGTCGCGCTTCACATCCTCGTTTGCCTCTTCACCGGTTGGTCCGTTGATTTCAAGTGTTTTGCCCATTATAGCAAGGTTAAGAATATTGAGCAGGCCGATTCCTGCAAGATTACTCCGGCGAAGTTCTCGGGTTCAAAAGAGGTTGTGCCGCTTCATTCTAGGAAAAGTTCTGCAGGTTCTTCATCAGCGGTGGATTTGGAAGAGAACTACTTCGATTTTAGAAAACAATGTTTTGTGTATTCAAAGGAGAAGGGAACTTTTTGCAAGCTTCTCTACCCCACCAAAGAAACATTTGGATATTATCTCAAGTGTAGTGGCCATGGCTCTGAAGCTAAAGTTCTTGCTGCTACTGAGAAATGGGGGCGGAATGTATTTGATTATCCTCAGCCAACATTTCAGAAATTGTTGAAAGAGCACTGCATGGAGCCTTTTTTTGTATTTCAGGTTTTCTGTGTGGGTCTCTGGTGTTTGGATGAATATTGGTATTACAGTTTGTTCACTCTATTTATGCTGTTTATGTTTGAGTCAACCATGGCAAAAAGTCGGTTGAAAACTCTAACAGAGTTAAGACGTGTTAGAGTGGATAGTCAGATCCTAATGGTACATCGCTGTGGCAAGTGGGTAAAACTCTCTGGTACAGACCTTTTGCCTGGGGATGTTGTCTCCATAGGTCGCTCGTCTGGTCAGAACGGGGAGGAGAAGTCTGTACCAGCAGACATGCTTCTATTGGCTGGAAGTGTGATTGTGAATGAAGCTATTCTGACAGGCGAGTCTACTCCTCAATGGAAGATTTCAATTGCGGGTAGGGGGATGGAGGAGAAATTGTCAGCAAAGCGAGATAAAAACCATGTTTTATTTGGTGGAACTAAAATATTGCAGCACACTCCAGATAAGAGTTTTCCTCTAAAAACACCTGATGGCGGCTGCTTGGCTGTTGTCCTGAGAACGGGGTTTGAAACAAGTCAAGGAAAGTTGATGCGAACAATCTTATTCTCTACAGAAAGGGTGACTGCTAATAGCTGGGAAAGTGGATTGTTCATTTTATTCTTGGTTGTATTTGCTCTTATTGCTGCTGGTTATGTGCTTGTTAAGGGGCTAGAAGATCCCACCAGGAGCAAGTATAAACTTATACTAAGTTGTTCACTTATTGTTACTTCTGTAATACCTCCCGAGTTACCAATGGAATTATCAATAGCTGTTAATACTTCTCTGATTGCACTGGCACGGCGTGGGATTTTTTGCACAGAGCCTTTTCGAATACCATTTGCTGGAAAGGTTGATATATGCTGTTTTGACAAGACAGGGACACTTACATCTGATGACATGGAATTTTCTGGAGTTGTTGGGTTGAATGGAACTACAGATTTGGAATCTGATACGAGTAGAGTGCCTGCGCAAACAGTAGAAATCCTGGCTTCTTGCCATGCATTGGTATTTGTTGAGAATAAGCTGGTTGGTGATCCTCTTGAGAAGGCTGCACTTAAGGGAATTGACTGGAGTTATAAATCTGATGACAAGGCTGTTCCAAAAAAGGGAAATGGCCATCCTGTCCAAATTGTTCATCGGTACCATTTTGCATCTCACTTAAAACGAATGGCAGTTGTTGTTCGCATTCAGGAGGAATTTTTCGCCTTTGTGAAGGGTGCCCCAGAAATTATACAAGATAAGCTCATTGATATACCGCCATCATATGTTGAGACCTACAAAAAATACACACGTCAAGGGTCCCGTGTTCTTGCTCTGGCTTACAAGTCTCTTCCTGACATGACAGTCAGTGAAGCTAGAAGCTTGGATAGGGATATGGTGGAGAGTGGACTTATTTTTGCGGGTTTTGTGGTATTTAATTGTCCCATAAGATCAGATTCGGCCACTGTTTTATCTGAATTGAAAGAATCCTCACATGACTTGGTGATGATTACCGGTGACCAAGCTTTGACAGCTTGCCATGTTGCTAGCCAAGTTAATATTATATCAAAACCTACATTAATCCTTGGCCGAGCACGAAATGGTGAGGGATATAATTGGATGTCCCCTGATGAGACTGAAAACATTCGCTACAGTGACAGAGAGGTTGAGTCTTTATCAGAGACTCATGATCTCTGTATTGGAGGTGATTGCATTGAGATGTTGCTACAGACGTCAGCTCATCTTCGGGTCATTCCTTATGTGAAGGTTTTTGCTAGAGTTGCTCCTGAGCAAAAAGAACTTATCATGACCACTTTCAAAACAGTGGGACGGGTAACTTTGATGTGTGGGGATGGAACCAATGATGTTGGAGCTTTGAAACAGGCCCACGTAGGAATTGCTCTTCTGAATGCATTGCCTCCAACTCAAAGTGGAAACTCCTCTTCAGATTCATCTAAGGAAGAAGGTTCAAAATCTGGCAAGCAAAAGAAATCTAAGCCTGCACTGGACCCATCTGGAAAGACTGCTGGTGAAGGCACTTCAAAAGCCAAAGTTGCTTCAAAATCAGATTCCACTAGCCACTCATCTGGTAACCGTCATCAGGCAGCTGTTGAGATGCAACGGCAGAAGCTTAAAAAAATGATGGACGAGCTTAATGAGGAAGGAGATGGTCGTGCACCCATTGTCAAGCTTGGTGATGCCTCAATGGCATCTCCATTCACCGCTAAGCATGCATCTGTTGCTCCCACCACTGACATAATTCGTCAAGGTCGGAGTACCCTAGTGACAACCCTCCAGATGTTTAAAATTCTTGGTCTCAATTGTCTTGCTACTGCGTATGTGTTGAGTGTTATGTATCTGGATGGTGTGAAGCTAGGTGACATACAAGCCACAATAAGTGGTGTCTTCACTGCTGCATTTTTCCTCTTTATCTCACATGCACGCCCCCTTCCCACTCTTTCTGCTGAACGCCCTCACCCCAACATCTTCTGTGCTTATGTTTTCCTTTCCCTCTTGGGACAATTTTCTATTCACCTGCTTTTCCTGATCTCATCTGTGAAAGAAGCTGAAAAATACATGCCAGATGAATGCATTGAACCTGATGCAAATTTTCATCCCAACCTGGTAAATACTGTTTCCTATATGGTGAGCATGATGCTTCAGGTGGCCACATTCGCTGTGAACTATATGGGCCATCCCTTCAACCAGAGTATTTCTGAAAACAGGCCGTTCCGGTATGCACTTGTTGCTGCTGTTGTTTTCTTTACTGTGATTACATCAGATCTCTTCAGGGACTTGAATGACTGGTTGAAGTTAGTGCCATTGCCAGTGGGATTAAGGGATAAACTATTGATTTGGGCGTTTCTAATGTTTTTGGTTTGCTATTCCTGGGAGAGACTATTGAGGTGGGCCTTCCCTGGTAAGATCCCAGCTTGGAAGAAGCGACAACGGCTTGCTGTATCTAATTTAGAAAAGAAGAAACAGGTCTAA 3570 0.4403 MSSFHVGGKVVDRVDLLRKKQWPWRLDVWPFAILYGAWVSAILPSLDFVDAAIIFGALVALHILVCLFTGWSVDFKCFAHYSKVKNIEQADSCKITPAKFSGSKEVVPLHSRKSSAGSSSAVDLEENYFDFRKQCFVYSKEKGTFCKLLYPTKETFGYYLKCSGHGSEAKVLAATEKWGRNVFDYPQPTFQKLLKEHCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSRLKTLTELRRVRVDSQILMVHRCGKWVKLSGTDLLPGDVVSIGRSSGQNGEEKSVPADMLLLAGSVIVNEAILTGESTPQWKISIAGRGMEEKLSAKRDKNHVLFGGTKILQHTPDKSFPLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFALIAAGYVLVKGLEDPTRSKYKLILSCSLIVTSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDICCFDKTGTLTSDDMEFSGVVGLNGTTDLESDTSRVPAQTVEILASCHALVFVENKLVGDPLEKAALKGIDWSYKSDDKAVPKKGNGHPVQIVHRYHFASHLKRMAVVVRIQEEFFAFVKGAPEIIQDKLIDIPPSYVETYKKYTRQGSRVLALAYKSLPDMTVSEARSLDRDMVESGLIFAGFVVFNCPIRSDSATVLSELKESSHDLVMITGDQALTACHVASQVNIISKPTLILGRARNGEGYNWMSPDETENIRYSDREVESLSETHDLCIGGDCIEMLLQTSAHLRVIPYVKVFARVAPEQKELIMTTFKTVGRVTLMCGDGTNDVGALKQAHVGIALLNALPPTQSGNSSSDSSKEEGSKSGKQKKSKPALDPSGKTAGEGTSKAKVASKSDSTSHSSGNRHQAAVEMQRQKLKKMMDELNEEGDGRAPIVKLGDASMASPFTAKHASVAPTTDIIRQGRSTLVTTLQMFKILGLNCLATAYVLSVMYLDGVKLGDIQATISGVFTAAFFLFISHARPLPTLSAERPHPNIFCAYVFLSLLGQFSIHLLFLISSVKEAEKYMPDECIEPDANFHPNLVNTVSYMVSMMLQVATFAVNYMGHPFNQSISENRPFRYALVAAVVFFTVITSDLFRDLNDWLKLVPLPVGLRDKLLIWAFLMFLVCYSWERLLRWAFPGKIPAWKKRQRLAVSNLEKKKQV 1189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01783 1189 Gene3D - 483 668 IPR023299 GO:0000166
Pumo10g01783 1189 NCBIfam P-type ATPase of unknown pump specificity (type V) 45 1146 IPR006544 GO:0006812|GO:0016020|GO:0019829|GO:0140358
Pumo10g01783 1189 SUPERFAMILY HAD-like 483 835 IPR036412 -
Pumo10g01783 1189 ProSitePatterns Hypothetical cof family signature 2. 809 831 - -
Pumo10g01783 1189 Coils Coil 894 914 - -
Pumo10g01783 1189 FunFam Cation-transporting ATPase 484 668 - -
Pumo10g01783 1189 SUPERFAMILY Calcium ATPase, transduction domain A 255 387 IPR008250 -
Pumo10g01783 1189 SFLD p-type atpase 469 952 IPR044492 -
Pumo10g01783 1189 MobiDBLite consensus disorder prediction 832 899 - -
Pumo10g01783 1189 Pfam E1-E2 ATPase 258 468 - -
Pumo10g01783 1189 SUPERFAMILY Calcium ATPase, transmembrane domain M 167 1166 IPR023298 -
Pumo10g01783 1189 FunFam Cation-transporting ATPase 669 844 - -
Pumo10g01783 1189 FunFam Cation-transporting ATPase 226 388 - -
Pumo10g01783 1189 MobiDBLite consensus disorder prediction 847 861 - -
Pumo10g01783 1189 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 494 678 IPR023299 GO:0000166
Pumo10g01783 1189 MobiDBLite consensus disorder prediction 875 896 - -
Pumo10g01783 1189 SFLD C1.7: P-type atpase like 469 952 - -
Pumo10g01783 1189 Pfam haloacid dehalogenase-like hydrolase 485 713 - -
Pumo10g01783 1189 NCBIfam HAD-IC family P-type ATPase 403 511 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pumo10g01783 1189 Gene3D - 226 388 - -
Pumo10g01783 1189 PRINTS P-type cation-transporting ATPase superfamily signature 690 700 - -
Pumo10g01783 1189 PRINTS P-type cation-transporting ATPase superfamily signature 488 502 - -
Pumo10g01783 1189 PRINTS P-type cation-transporting ATPase superfamily signature 308 322 - -
Pumo10g01783 1189 PRINTS P-type cation-transporting ATPase superfamily signature 809 828 - -
Pumo10g01783 1189 ProSitePatterns E1-E2 ATPases phosphorylation site. 490 496 IPR018303 -
Pumo10g01783 1189 CDD P-type_ATPase_cation 170 1104 IPR047820 -
Pumo10g01783 1189 PANTHER CATION-TRANSPORTING ATPASE-RELATED 12 1165 IPR006544 GO:0006812|GO:0016020|GO:0019829|GO:0140358
Pumo10g01783 1189 Gene3D - 669 844 IPR023214 -
Pumo10g01783 1189 MobiDBLite consensus disorder prediction 832 846 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01783 1 1189 Primary Pumps ATPases AT5G23630 77.824 0.0 1915
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01783 K14950 - gmx:100789385 2261.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01783 10 23481972 23498081 Pumo10g01783 10 23481972 23498081 ECH