Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01774 ATGGAGAAATGGTGTATTCGTACAAGTCCCTTAGGTAAGGACAGATATTATAATAGGTATTGGTGGTTTCATCGTGATGGGAAGATATTCGTTGAAAGTCCTGACTCCAAGGAGTGGGGATACTACAGTAGCAAGGAAGAGCTTGATGCATTGATGAGTTCACTGAATTGCAAAGGCGAGAGGGAAAAGGCACTGCATAAACAACTGGAAAAATATTATAATAGAATATGCTCAGAACTGCAGAAAAGTTCAAAGGATTTGGTGCATGAGATTACCCAGGATGACTCTATGGTCCGGAGGTCTACTCGTGTTCGGGCTCCACCTAGGGAAAATCCTTCCAAAGCTTTCCTCAAATATGCCAATAAGTGGAAAGAAGAGTAA 381 0.4173 MEKWCIRTSPLGKDRYYNRYWWFHRDGKIFVESPDSKEWGYYSSKEELDALMSSLNCKGEREKALHKQLEKYYNRICSELQKSSKDLVHEITQDDSMVRRSTRVRAPPRENPSKAFLKYANKWKEE 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01774 126 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 6 72 IPR028941 -
Pumo10g01774 126 PANTHER BROMODOMAIN ADJACENT TO ZINC FINGER DOMAIN, 2A 1 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01774 Pumo-Chr10 23376831 23378004 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01774 2 72 Homeobox Transcription Factor Family AT5G44180 40.506 1.26e-09 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01774 - - gmx:100784607 249.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01774 10 23376831 23378004 Pumo10g01774 10 23376831 23378004 ECH
Pumo6g00613 6 7731556 7736953 Pumo10g01774 10 23376831 23378004 PCT