Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01752 ATGGCTGATTTTCTGACCTCTACCCACCGAGCGAAATGGATTTTCTCTCCTCAACAGCTGGTTGAGAAATATAGAGCTGCTAATCAGAGAGCCAAACAAATTTTAGAGAAGTGTGGAGCAACTCTAATGGAAGTAGATGTTAATGGGTCATTGTCATATCGTGAACCCCAGATGACTGCAAAGGACAATGCTGAAAAGCATTCTCAGAAAAAACCTCTTAGTATTGAAGAAGAACAATGTGTGAGGGAATTTTATGAAAAGAAGATACGGAAAGTATGTGCAAAATTCCCCTTACCTCGTAAGATCCAGGCAACAGCCCTTATCTTTTTCAAAAGGTTCTATTTGCAATGGTCAGTGATGGAACATCAGCCAAAATATATAATGATGACCTGCATATATGCTGCTTCTAAGATAGAAGAAAATTATGTGTCAGCTGAGGAGCTTAGTAAGGTTGGGGATTTACAGGATCAACAAGTGATTCTCAATTACGAGATGGTAGTTTATCAGAGTTTGGTATTTGATCTTATTGTTTATGCACCATATCGCTCAGTTGAAGGTTTTATAAATGATATGGAGACTTTGCAAGAAAAAGCAGGATTGAAAGTTGATAAAATGATGCTTACAGATGCTCCACTTTTATTTCCTCCTGGGCAGTTGGCCTTGGCTGCTTTGCGCAACACAAATGCACTCCATAAAGTCATTGACTTTGACAGTTATCTTAGGAGCATTTTTTCCCGTCAGAATTCCATGCATACAATGTCCGAGCTTTCTGAATCACTGAATGCAATTGATTCTTGGATGCAGGTTAGAAAATTCAAGCGTCCTTCTAGGAAGGTATTGGAGCCTATCGACAAAAAACTGATGTCTTGTTGGGGTTTTAGCTCTCACGACGAGGGCAAGAAGCGGGAGGAAGAAATCAAAGCACAAGTCTGA 933 0.3976 MADFLTSTHRAKWIFSPQQLVEKYRAANQRAKQILEKCGATLMEVDVNGSLSYREPQMTAKDNAEKHSQKKPLSIEEEQCVREFYEKKIRKVCAKFPLPRKIQATALIFFKRFYLQWSVMEHQPKYIMMTCIYAASKIEENYVSAEELSKVGDLQDQQVILNYEMVVYQSLVFDLIVYAPYRSVEGFINDMETLQEKAGLKVDKMMLTDAPLLFPPGQLALAALRNTNALHKVIDFDSYLRSIFSRQNSMHTMSELSESLNAIDSWMQVRKFKRPSRKVLEPIDKKLMSCWGFSSHDEGKKREEEIKAQV 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01752 310 SMART cyclin_7 87 169 IPR013763 -
Pumo10g01752 310 Gene3D - 178 269 - -
Pumo10g01752 310 Pfam Cyclin, N-terminal domain 66 175 IPR006671 -
Pumo10g01752 310 SUPERFAMILY Cyclin-like 180 292 IPR036915 -
Pumo10g01752 310 Gene3D - 63 176 - -
Pumo10g01752 310 CDD CYCLIN_AcCycH_rpt1 3 175 - -
Pumo10g01752 310 SUPERFAMILY Cyclin-like 6 177 IPR036915 -
Pumo10g01752 310 CDD CYCLIN_AcCycH_rpt2 178 290 - -
Pumo10g01752 310 Pfam Cyclin C-terminal domain 180 260 IPR031658 -
Pumo10g01752 310 PANTHER CYCLIN 61 256 IPR043198 GO:0006357|GO:0016538
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01752 Pumo-Chr10 23015949 23022480 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01752 1 264 Core Cell Cycle Gene Families AT5G27620 59.353 7.61e-115 332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01752 K06634 - gmx:547736 478.404