Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01746 ATGAAGGGAGAATTAGAGTTGCCACCTGGGTTCAGATTTCACCCCACTGATGACGAATTGGTGAATCACTACTTGTGTAGGAAGTGCGCTGGTCAACCAATCGCTGCTCCCATCATCAAGGAGATCGATTTGTACAAGTTTGATCCATGGCAGCTTCCAGAAATGGGTTTTTATGGCGAGAAAGAATGGTACTTCTTTTCCCCTCGGGACCGGAAATACCCGAACGGTTCGCGGCCGAATCGTGCCGCCGGAAGCGGGTATTGGAAAGCCACCGGCGCCGATAAACCGATCGGAAAACCGAAAGCGCTTGGGATCAAGAAAGCTCTAGTTTTTTATGCCGGAAAAGCCCCAAAAGGAGTGAAAACCAATTGGATCATGCACGAATATCGCCTCGCCAATGTTGACCGATCTGCCTCCAAGAAAAACAACAACTTGAGGCTTGATGATTGGGTGTTGTGTCGAATCTACAACAAGAAGGGGAAGATTGAGAAATACAACACAGCCGCACCGAAAGTGAATTCTGGGGTGGTTTATAATTTTGAGCACGAGAACGAGACGAAGCCGGAGATTCATAAGCTTGGGAACGAGCAATTGTACATGGACACTTCAGATTCGGTGCCAAGGTTGCACACGGACTCGAGCAGCTCGGAGCACGTGGTTTCGCCCGATGTCACGTGCGAGAGGGAGGTGCAGAGCGACCCCAAGTGGAACAATCTGGACCTAGACCTACAGCTAGAAAACGCGTTTGATTTTCAGTTCAATTACTTGGATAATAACCTAAACGTGGATGACCCTTTTGCCACTGTTCAGTACCAAATGGGCCAGCTCTCGCCTTTGCAGGACATGTTCATGTACCTACAGAAGCCGTTTTGA 873 0.4891 MKGELELPPGFRFHPTDDELVNHYLCRKCAGQPIAAPIIKEIDLYKFDPWQLPEMGFYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGKPKALGIKKALVFYAGKAPKGVKTNWIMHEYRLANVDRSASKKNNNLRLDDWVLCRIYNKKGKIEKYNTAAPKVNSGVVYNFEHENETKPEIHKLGNEQLYMDTSDSVPRLHTDSSSSEHVVSPDVTCEREVQSDPKWNNLDLDLQLENAFDFQFNYLDNNLNVDDPFATVQYQMGQLSPLQDMFMYLQKPF 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01746 290 Gene3D NAC domain 16 163 IPR036093 GO:0003677|GO:0006355
Pumo10g01746 290 PANTHER NAC TRANSCRIPTION FACTOR 56 7 205 - -
Pumo10g01746 290 Pfam No apical meristem (NAM) protein 8 131 IPR003441 GO:0003677|GO:0006355
Pumo10g01746 290 FunFam NAC transcription factor 16 162 - -
Pumo10g01746 290 ProSiteProfiles NAC domain profile. 7 158 IPR003441 GO:0003677|GO:0006355
Pumo10g01746 290 SUPERFAMILY NAC domain 3 158 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01746 Pumo-Chr10 22912391 22914112 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01746 1 290 NAC Transcription Factor Family AT1G01720 64.667 2.11e-129 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pumo10g01746 NAM 6.3e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01746 - - gmx:100814504 554.288