Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01723 ATGTCTGGAAAGGCGAAGAGGAGAGACGATGACGGTGCTTCCGACGCCGACTCTGAAGGCCACGCGCCGCCCAAGAAGTCCCTCAAGAAAGATTCCGACGACGATCCCGACTCTATTATCGTCTGCGAGATTTCGAAGAACAGGAGGGTTTCCGTGAGGAACTGGCAAGGCAGGATTGTGGTTGACATTCGCGAGTTTTACGTCAAAGATGGCAAGCAAATGCCTGGCAAGAAAGGTATCTCGTTGACCATGGATCAGTGGAATATGCTTCGTAGCCATGTTGATGAAATTGACAAGGCAGTTAGTGAGAATTCGTAG 318 0.5031 MSGKAKRRDDDGASDADSEGHAPPKKSLKKDSDDDPDSIIVCEISKNRRVSVRNWQGRIVVDIREFYVKDGKQMPGKKGISLTMDQWNMLRSHVDEIDKAVSENS 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01723 105 MobiDBLite consensus disorder prediction 1 37 - -
Pumo10g01723 105 Pfam Transcriptional Coactivator p15 (PC4) 42 93 IPR003173 GO:0003677|GO:0006355
Pumo10g01723 105 Gene3D Transcriptional Coactivator Pc4; Chain A 29 105 IPR009044 GO:0003677|GO:0006355
Pumo10g01723 105 FunFam Putative transcriptional co-activator 32 105 - -
Pumo10g01723 105 SUPERFAMILY ssDNA-binding transcriptional regulator domain 41 102 IPR009044 GO:0003677|GO:0006355
Pumo10g01723 105 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR 19 104 IPR045125 GO:0003713|GO:0060261
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01723 Pumo-Chr10 22665611 22668064 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Coactivator p15 Pumo10g01723 PC4 2.8e-25 CL0609
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01723 K25815 - gmx:100820368 171.4