Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01717 ATGAAGTTAATCGGCGACGGTGCCGGTGGCCGGAAGGTCCTCGTCGGCGTTAAATTAGATCCTCGCAGCCGGGAATTGCTGACGTGGGCGCTCGTCAAGGTCGCCGAGCCCGGCGACCTCGTCATTGCGCTTCACGTCCTCGACACCATCACCGAGGGAACGGCATCGCTGTTATCTCTCGTGAAGACTTTCGATTCCGTTCTCGCCGTTTACGAAGGCTTCTGCAACCTAAAACAGGTTGGTCTGAGGCTTAAGGTGTGTCGCGGTGGCTCGGTTCGGAAGGCTCTGGTGCATGAGGCGAAGGCGTTTGGCGTTTCTACCGTGATTTTGGGAACTTCTAAATCTCATCACACTATTCGTTCTTCTGCGTGGGTTGCGAAGTACTGCGCGAAGAAATTGCCAAAGTGTATCTCTGTGTTCTCCGTTGATAATGGCAAAATCGCGTTCCGGAGAGAGGCTAATGGAAATTGCAGTGATCGAGAGAAATTGTGTGAAGGGTCAAGTTTGTCGTCAAAATCGTTGGTGGTTTATACAAATAGGAATATGAAGAGTTGTGGAAGTTGTGCATTGCAAGAGTGTTCTGGAACTGAGTTTGAGCAAGGGCTGTGTGAGGATGTTGAGAAGGAGAATCCGCTTGCTTTGGTTCCGTTTAAGAAGCTTGATGATGCTCCTTGTTTTTCAGTTGTGGTGGATAATTCGAAGCATAAACCTGGTTGGTCGCTGCTTCGCCATGTGTTTCATCACAAGAAGCATTCTCCCAAGTCTTCTATGAAGAATACGTTTGTTTTTCAACGGGCGTTGCGGCAGCCGAATTTTCATTCTTCGGCTGTAGTCCATCCAGATCATAAACAAATTAGTATTGAGGAGATTGATGAATCCCCTCTTGATGGGGTGAGTGGTGCCGTTGTGCCATTTGGATCTGCCACTACTATCTTTAGTCTTCCCTCCATTTGCAGTGACTCGAGTAGCCTTCCTGATGAATTGTTGGTATTACAAGAGAAGTACTCGTCTTCGTGCCGATTATATAGTTTGCAGGAACTTGTATCTGCAACCTCCAACTTTGCACCCGAAAATTTGGTTGGCAAAGGTGGTTGTAGTTATGTTTACAGAGGAAGTCTTCCAGATGGCAAGGAATTGGCTGTGAAAATTTTGAAGCCATCTGAAAACGTGATAAAGGAGTTTGTTCAGGAAATTGAGATCATTACAACGTTGCGCCACAAGAACATAATATCTATATCTGGCTTTTGTTTAGAGGGCAACCAGTTGCTACTAGTTTATGATTTTTTATCAAGGGGAAGCCTAGAAGAAAACCTTCATGGCAACAAGGCAGACTGTAGTGCATTTGGTTGGCAAGAAAGGTACAAGGTGGCCGTGGGTGTAGCTGAGGCACTGGATTATCTGCATAATGGTTGTGCTCAGGCTGTGATCCATAGGGATGTGAAATCTTCTAATATCCTTCTTTCAGATGATTTTGAGCCTCAGCTTTCAGATTTTGGATTGGCTAGTTGGGATTCATCTTCTTCCCATATTACTTGTACTGATGTGGCCGGAACTTTTGGATACCTTGCACCTGAGTACTTTATGCATGGTAGAGTGACTGATAAAATTGACGTATATGCTTTTGGTGTTGTACTCCTTGAGCTTCTCTCAAATAGGAAACCCATTAACAATGAATGTCCAAAGGGCCAGGAGAGCCTTGTTATGTGGGCAACACCAATTTTGAAAGGTGGGAAGTTTTCCCAGTTGCTTGATCCAAGCCTAGGCAGTGAATACGACGATTGCCAGATCAAGAGAATGGTTTTGGCCGCTACTCTCTGCATCAGACGGGTTCCTAGATTGAGACCTCAAATCAGCCTTGTAAGCCTTTTTGCCTGTGCAAATGTTCTTCATTCCATTTGTCCTTCCTTTTATGTCCTTTTGAATATCACTCCTGTTTTTTCAATGATGCAGATATTGAAACTTCTGCACGGTGATGAAGAGGTAACAAGATGGGCAGAACAAGAAGTTAATGCACCACAGGAACTCGATGGATTCGATGAGGAACCAGTTCCAACTAACATTCAGTCCCACCTGAACCTTGCTTTACTGGACTTGGAGGATGATACGGTTTCTATCAGTAGCACTGAGCAGAGTGTCTCTTTGGAGGACTATTTGCAGGGAAGATGGAGTCGCTCTTCAAGTTTTGACTAA 2190 0.4525 MKLIGDGAGGRKVLVGVKLDPRSRELLTWALVKVAEPGDLVIALHVLDTITEGTASLLSLVKTFDSVLAVYEGFCNLKQVGLRLKVCRGGSVRKALVHEAKAFGVSTVILGTSKSHHTIRSSAWVAKYCAKKLPKCISVFSVDNGKIAFRREANGNCSDREKLCEGSSLSSKSLVVYTNRNMKSCGSCALQECSGTEFEQGLCEDVEKENPLALVPFKKLDDAPCFSVVVDNSKHKPGWSLLRHVFHHKKHSPKSSMKNTFVFQRALRQPNFHSSAVVHPDHKQISIEEIDESPLDGVSGAVVPFGSATTIFSLPSICSDSSSLPDELLVLQEKYSSSCRLYSLQELVSATSNFAPENLVGKGGCSYVYRGSLPDGKELAVKILKPSENVIKEFVQEIEIITTLRHKNIISISGFCLEGNQLLLVYDFLSRGSLEENLHGNKADCSAFGWQERYKVAVGVAEALDYLHNGCAQAVIHRDVKSSNILLSDDFEPQLSDFGLASWDSSSSHITCTDVAGTFGYLAPEYFMHGRVTDKIDVYAFGVVLLELLSNRKPINNECPKGQESLVMWATPILKGGKFSQLLDPSLGSEYDDCQIKRMVLAATLCIRRVPRLRPQISLVSLFACANVLHSICPSFYVLLNITPVFSMMQILKLLHGDEEVTRWAEQEVNAPQELDGFDEEPVPTNIQSHLNLALLDLEDDTVSISSTEQSVSLEDYLQGRWSRSSSFD 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01717 729 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 11 115 - -
Pumo10g01717 729 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 10 143 - -
Pumo10g01717 729 Pfam Universal stress protein family 11 134 IPR006016 -
Pumo10g01717 729 SMART serkin_6 354 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g01717 729 CDD USP_Like 12 137 - -
Pumo10g01717 729 ProSiteProfiles Protein kinase domain profile. 354 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g01717 729 Gene3D Transferase(Phosphotransferase) domain 1 429 629 - -
Pumo10g01717 729 Gene3D HUPs 2 137 IPR014729 -
Pumo10g01717 729 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 323 428 - -
Pumo10g01717 729 Pfam Protein kinase domain 357 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g01717 729 ProSitePatterns Serine/Threonine protein kinases active-site signature. 475 487 IPR008271 GO:0004672|GO:0006468
Pumo10g01717 729 Gene3D Phosphorylase Kinase; domain 1 322 428 - -
Pumo10g01717 729 PANTHER OS08G0249100 PROTEIN 120 621 IPR046958 -
Pumo10g01717 729 FunFam Putative receptor-like serine/threonine-protein kinase 429 630 - -
Pumo10g01717 729 SUPERFAMILY Protein kinase-like (PK-like) 334 618 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01717 Pumo-Chr10 22599213 22602885 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01717 337 624 Trihelix Transcription Factor Family AT1G68690 45.578 5.72e-77 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Pumo10g01717 Pkinase 1.5e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01717 - - gmx:100815722 1285.4