Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01698 ATGAATCTCTCTTATCTCACTCGCTTCCCTGAACGTCTCGTTGCTCCTCTTTGTGCCACAGTTCCCACTACCACTACCACTAGGGGCAATAGGGCGGATAATTTTGCAATTGAAGGGCGTAATCTGAAGTTCTCATTCGCGACGAGGCAAACACAGGATGTACCCGTTCTTAAGGATTGTTCTATTCGCATTCCTTGCGGGCAGTTTTGGATGCTTCTTGGACCCAATGGGTGTGGAAAATCTACCCTCTTGAAGATTTTGGCTGGTCTCTTGACTCCAACTTCAGGAACAGTGTACGTGAATGGGCCTAAAAGTTTTGTTTTCCAAAATCCAGATCATCAGGTGGTAATGCCTACTGTAGATGCTGATGTTGCATTTGGTCTTGGTAAGATCAATTTGACCAATGATGAAGTCAGATCTAGGGTGTCAAGAGCTTTGCGTGCTGTAGGTCTGTCTGACTACATGAAGAGATCTGTCCAAACTCTGAGTGGCGGTCAGAAGCAGAGGGTTGCCATTGCCGGTGCTCTCGCTGAAGCTTGTAAAGTTCTGTTGTTGGATGAGCTCACAACATTCTTAGATGAAACTGACCAGGTTGGGGTTATCAAAGCTGTTAGGAACTCTGTGGATACCACTGCAGAAGTTACGGCATTATGGGTCACCCATCGATTGGAAGAACTAGAGTTTGCAGATGGTGCCATCTACATGGAGGATGGGAAGGTTGTCATGCATGGAGATGCCACTAGCATTAGGAGTTTCATTGAAGCCAGGCAGTCTGCCTATATAAATCAGATTAATTCTTGA 801 0.4582 MNLSYLTRFPERLVAPLCATVPTTTTTRGNRADNFAIEGRNLKFSFATRQTQDVPVLKDCSIRIPCGQFWMLLGPNGCGKSTLLKILAGLLTPTSGTVYVNGPKSFVFQNPDHQVVMPTVDADVAFGLGKINLTNDEVRSRVSRALRAVGLSDYMKRSVQTLSGGQKQRVAIAGALAEACKVLLLDELTTFLDETDQVGVIKAVRNSVDTTAEVTALWVTHRLEELEFADGAIYMEDGKVVMHGDATSIRSFIEARQSAYINQINS 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01698 266 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 30 254 IPR027417 -
Pumo10g01698 266 PANTHER ABC TRANSPORTER I FAMILY MEMBER 10 37 251 - -
Pumo10g01698 266 CDD ABC_cobalt_CbiO_domain1 38 239 IPR015856 GO:0005524|GO:0016020|GO:0055085
Pumo10g01698 266 SMART AAA_5 66 239 IPR003593 GO:0016887
Pumo10g01698 266 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 37 262 IPR003439 GO:0005524
Pumo10g01698 266 Gene3D - 32 265 IPR027417 -
Pumo10g01698 266 Pfam ABC transporter 57 189 IPR003439 GO:0005524
Pumo10g01698 266 ProSitePatterns ABC transporters family signature. 162 176 IPR017871 GO:0005524|GO:0016887
Pumo10g01698 266 FunFam ABC transporter I family member 10 33 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01698 Pumo-Chr10 22364493 22367598 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01698 20 249 Calmodulin-binding Proteins AT2G36910 28.629 5.83e-22 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01698 - - gmx:100813654 465.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01698 10 22364493 22367598 Pumo10g01698 10 22364493 22367598 ECH