Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01692 ATGGCCGAACCAAAAACGCCAGGGTTTCGGTTTTATCCCACTGACGTTGAGCTGATTGAGTATTTTCTGAAGAGGAAGGTTCGGGGTAAGAAATTCCCTGCCGAAGTTATTGCTGAACTTGACTTGTACAAGTATGCTCCGTGGGATCTCCCAGATATGTCTTTGCTCAAGAATGGGGATTTGAATTGGTACTTCTTTTGCCCTAGGGGAAAGAAGTATTCTACTGGTGGGAGGTTGAATCGGGCTACGGAGGCTGGGTATTGGAAGACTACTGGGAAGGACAGAGCAATTGAACACAAAAATCGAGTTGTGGGGATGATAAAAACTCTGGTTTTTCATACTGGTAGAGCCCCTAAGGGAGACCGAACTGATTGGGTTATGCATGAATTTAGACTTGATGATAAGGCGCTGGCTGACAAAGGCGTACCGCAGGACTCCTATGTGATTTGTAGGGTGTTCCAAAAGGAAGGTCCTGGTCCCAGGAATGGTGCACAATATGGTAAACCATTTGATGAGAAAGAGTGGGAAACAGATGAGGAAATTGATTCTGTACAATCTGCCCCAGTTGCTGCTGTTTCTGCACCTGTTCCTATACAACCTAGTGAAAGCCATATTTCTGTTGCTAATGACATCCATCCCTCTACAAGTGGATGTGCTGGATTGACCTCTGTATCATGTGTATCAGAATTGATGCCCTCTTGCTCAACACATCCTTCTGCACCAAACAATCTAGTTGACTCTGTATCATGTGTATCAGAATTGATGCCCTCTTGCTCGACACATCTTTTGGCATCAAACAATCAAGTTGACTCTGTATCATGTGTATCAGAATTGATACCCTCTTGCTCTTCACATCCTTCAGAATTAAACAATCAAGTTGGCTCTGTATCATGTGTATCAGAATTGATGCCCCCTTGCTCAGCACATCCTTCAGTTCCGAACAATCAAGTTGATGATGACATTTTATCTTTGCTTGATTCTTTCAAAGAAGATGATGACACATTGGCTGTGAATGAAAACAACAGAGTTGAGAAGGTTGTTGATCCTGATCAGGCAAACAATGCTGAACGTGCACCATTTTCAGATCCAAATGCTATTTTTGAGGAGTTGGGAGACTTTCACAGCTTGGTTGGATTGGGTGAAGGCAGTTTTTCCTTTGGCCAGAAAGATGAATATACTACAAGCGAAATGGTTTATACAGGTGATATATTCGGGTCTTGTGAAGACTTTTTGGAGTTGACTGACTTAGAGCCGCCGCAGTTCCGGCAGAATAAACATGGAAGTGGTAGCCAAGATAAGTAA 1302 0.4324 MAEPKTPGFRFYPTDVELIEYFLKRKVRGKKFPAEVIAELDLYKYAPWDLPDMSLLKNGDLNWYFFCPRGKKYSTGGRLNRATEAGYWKTTGKDRAIEHKNRVVGMIKTLVFHTGRAPKGDRTDWVMHEFRLDDKALADKGVPQDSYVICRVFQKEGPGPRNGAQYGKPFDEKEWETDEEIDSVQSAPVAAVSAPVPIQPSESHISVANDIHPSTSGCAGLTSVSCVSELMPSCSTHPSAPNNLVDSVSCVSELMPSCSTHLLASNNQVDSVSCVSELIPSCSSHPSELNNQVGSVSCVSELMPPCSAHPSVPNNQVDDDILSLLDSFKEDDDTLAVNENNRVEKVVDPDQANNAERAPFSDPNAIFEELGDFHSLVGLGEGSFSFGQKDEYTTSEMVYTGDIFGSCEDFLELTDLEPPQFRQNKHGSGSQDK 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01692 433 Gene3D NAC domain 14 157 IPR036093 GO:0003677|GO:0006355
Pumo10g01692 433 ProSiteProfiles NAC domain profile. 5 155 IPR003441 GO:0003677|GO:0006355
Pumo10g01692 433 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 6 257 - -
Pumo10g01692 433 FunFam Nac domain-containing protein 86 14 158 - -
Pumo10g01692 433 Pfam No apical meristem (NAM) protein 7 132 IPR003441 GO:0003677|GO:0006355
Pumo10g01692 433 SUPERFAMILY NAC domain 6 155 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01692 Pumo-Chr10 22303505 22307007 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01692 7 419 NAC Transcription Factor Family AT5G09330 40.241 4.02e-89 277
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pumo10g01692 NAM 8.4e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01692 - - gmx:100781170 693.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g00676 6 8498039 8505791 Pumo10g01692 10 22303505 22307007 PCT