Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01689 ATGGGAGAGTTGCAGCAAATAGTGGAGATGAAGGAAGTTAGCAATAACATTGTAAGGTCTGAAAACAAAGCCAGACTTGTCATTCTGGAACTAGCCCACATGATGAGTGTCCCTATGTCCCTCATGGCTGTCATTAATCTTAAAGTTCCCGAGGCCATATGGCAAGATGGCTCCAACATTCCCCTCTCCGCCGCCCAAATTCTGGACCGCATCCGTCCCCACGGCAGCGGGGACGCCGAGAACCTCCAGCGCCTCCTCCGCTTGCTCACCAGCTATGACATCTTTGTCGAGCACTTTAGCAGCAGTGACCAAAGGAAATACTCCCTCACTGACGTCGGAAAAACTCTTGTTGACGATGACCAAGGTCTATCCTATGCATATTACATGCTGCAGCATCATCAGGATGCGTTGATGCGAGCTTGGCCGTTGGTGGGGGAAGCAGTGGAGGATCCAACGACGGAGCCATTCGTGAAGGCGAACAAAGAATCAGCAATAGAGTACTACACGAAGAGGCCTGATGTAATGCCCTTGATTTACAAGTCCTTGACTGGGATGTGTGTACCCTTCATGAGGGAAATGCTTGAAGTATATGACGGCTTCCAAGGGGTGGAAACACTGGTCGATGTTGGTGGCAATTCTGGTGTTTCTCTTCGCATGATCATGGAGAAATACCCTAACGTTCGCAGAGGCATCAACTATGACTTGCCCGACATGGTGGCCAGTGCACCGCACATTCCAGGTGTAACACATGTTGGTGGTAGCGCGTTTGAATCTGTTCCTCCTGGGGATGCCATCTTCGTCAGGTGGGCATTTTTAGCATGGACAGACGAGGAATCCAAGCTAGTGTTGCAGAATTGTTACAAGGCACTTCCAGAGGACGGAAAAATGATTGTTTGCGAACCCGTGCTGCCGGAGCTGACAGATGAGAGTCACCGAACAAGAGCATTGCTTGGTGGTGACATATTCATAATGACTATGTATAGAACTAAGGGCAAGCACAGAACTGAACAACAATTTAAACAGCTCGGCATTGCTGCTGGTTTTCCTCGTTTCAGTGCCTTCTATGTTGACCCTTATATGGGTGTCCTTGAGTTTCAGAAATGA 1104 0.49 MGELQQIVEMKEVSNNIVRSENKARLVILELAHMMSVPMSLMAVINLKVPEAIWQDGSNIPLSAAQILDRIRPHGSGDAENLQRLLRLLTSYDIFVEHFSSSDQRKYSLTDVGKTLVDDDQGLSYAYYMLQHHQDALMRAWPLVGEAVEDPTTEPFVKANKESAIEYYTKRPDVMPLIYKSLTGMCVPFMREMLEVYDGFQGVETLVDVGGNSGVSLRMIMEKYPNVRRGINYDLPDMVASAPHIPGVTHVGGSAFESVPPGDAIFVRWAFLAWTDEESKLVLQNCYKALPEDGKMIVCEPVLPELTDESHRTRALLGGDIFIMTMYRTKGKHRTEQQFKQLGIAAGFPRFSAFYVDPYMGVLEFQK 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01689 367 Gene3D Vaccinia Virus protein VP39 122 367 IPR029063 -
Pumo10g01689 367 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 29 367 IPR016461 GO:0008168
Pumo10g01689 367 Gene3D - 11 121 IPR036388 -
Pumo10g01689 367 PANTHER O-METHYLTRANSFERASE 31 354 IPR016461 GO:0008168
Pumo10g01689 367 Pfam O-methyltransferase domain 144 348 IPR001077 GO:0008171
Pumo10g01689 367 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 123 364 IPR029063 -
Pumo10g01689 367 PIRSF O-mtase 5 367 IPR016461 GO:0008168
Pumo10g01689 367 SUPERFAMILY "Winged helix" DNA-binding domain 21 119 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01689 Pumo-Chr10 22183873 22187376 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01689 15 367 Monolignol Biosynthesis Gene Families AT3G53140 61.064 5.38e-165 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01689 - - ccaj:109819366 577.015