Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01688 ATGGGTGAGGTGCATGAAACAGTGGAGATGAAGAAGGAGGTTACCAAGACCATTGCATTTGCAAGGTCTGAAAACAAAGCCAGACTTGCCATTCTGGAACTAGCCCACATGATGAGTGTGCCTATGTCCCTCATGGCTGTCATTAATCTTAAAGTTCCCGAGGCCATATGGCAAGATGGCTCCAACACTCCCGTCTCCGCCGCCGAAATTCTGGACCGCATCCGTCCCCATGGCGGCGGCGACGCCGAGAACCTTCAGCGCCTCCTCCGCTTGCTCACCAGCTATGACATCTTTGTCGAGCACTTTAGCAGCAGTGGCCTAAGGAAATACTCCCTCACTGATGTTGGAAAAACACTTGTTGACAATGAACAAGATCTATCCTATGCATATTACATGCTCCAGCACCATCAGGATGCATTGATGCAAGGTTGGCCGTTGGTGGGAGAAGCAGTGAAGGATCCAACTACGGAGCCATTTGTGAAGGTGCACGGAGAACCACCACTAGAATACTACGCGAAGAGGCCAGATGTATTGATCTTGTTTCATAAAGCCATGACTGGGATGTGTGTACCCTATATGAGGGAAATGTTGCAAGTCTATGATGGCTTCCAAGGGGTGGAAACACTAGTGGATGTTGGTGGTAATTCTGGTGTCACACTTCGCATGATCATGGAGAAACACCCTAACGTTCGCAAAGGCATCAATTATGACTTGCCCGATATGGTGGCCCGTGCACCGCAAATTCCAGGTGTAACAAACGTTGGTGGTAACGCGTTTGAATATGTACCTCCTGGAGATGCCATCTTTATCAAGTGGTTATTTTTAGGGTGGACAGATGAGGAATCCAAGCTAGTGTTGCAAAATTGTCACAAGGCACTTCCAGAAGATGGAAAGTTGATTGTTTGTGAACCCATGCTGCCGGAGTTGACAGATGAGAGTCAACGAACAAGAGCATTACTTGGTGGTGACATATTCGTAATGACTATGTATAGAACTAAGGGAAAGCACAGGACTGAAGAAGAATTTAAACAGCTCGGCATTTCTGTTGGTTTTCCTCATTTTCGTGCCTTCTATATTGATTCTTATTTGGCTGTGCTTGAGTTTCACAAATGA 1113 0.4672 MGEVHETVEMKKEVTKTIAFARSENKARLAILELAHMMSVPMSLMAVINLKVPEAIWQDGSNTPVSAAEILDRIRPHGGGDAENLQRLLRLLTSYDIFVEHFSSSGLRKYSLTDVGKTLVDNEQDLSYAYYMLQHHQDALMQGWPLVGEAVKDPTTEPFVKVHGEPPLEYYAKRPDVLILFHKAMTGMCVPYMREMLQVYDGFQGVETLVDVGGNSGVTLRMIMEKHPNVRKGINYDLPDMVARAPQIPGVTNVGGNAFEYVPPGDAIFIKWLFLGWTDEESKLVLQNCHKALPEDGKLIVCEPMLPELTDESQRTRALLGGDIFVMTMYRTKGKHRTEEEFKQLGISVGFPHFRAFYIDSYLAVLEFHK 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01688 370 Pfam O-methyltransferase domain 147 351 IPR001077 GO:0008171
Pumo10g01688 370 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 126 367 IPR029063 -
Pumo10g01688 370 PIRSF O-mtase 8 370 IPR016461 GO:0008168
Pumo10g01688 370 PANTHER O-METHYLTRANSFERASE 34 357 IPR016461 GO:0008168
Pumo10g01688 370 Gene3D - 14 124 IPR036388 -
Pumo10g01688 370 SUPERFAMILY "Winged helix" DNA-binding domain 24 123 IPR036390 -
Pumo10g01688 370 Gene3D Vaccinia Virus protein VP39 125 370 IPR029063 -
Pumo10g01688 370 Coils Coil 366 370 - -
Pumo10g01688 370 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 32 370 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01688 Pumo-Chr10 22155725 22160415 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01688 21 370 Monolignol Biosynthesis Gene Families AT3G53140 60.734 3.87e-159 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01688 - - ccaj:109819366 574.704