Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01667 ATGAGTTTGATGGAAACAGAAAGCTCAGAAGAGGGTGCAGGCCTTCTAGAGCCTCCTGATCCCAATGTTCTTGAAATTGATCCTACTAATCGTTACGTTAGGTATAAGGAAGTTATCGGCCAAGGAGCTTTCAAGACTGTTTACAAGGCATTTGATGAAATCAATGGACTTGAAGTTGCATGGAGCCAAGTTCAGATTGATGAGGTTTTACAGACACCAGGTGGCTTAGAGAGGCTGTACTCAGAAGTGCATCTCTTGAAGTCACTGAAGCATGATAGCATAGTAGCTTTCTACAATTCCTGGATTGATGACAAGCACAGGACTCTCAACTTGATTACTGAGTTGTTCACCTCAGGGAACCTCAGACAGTATAGTAAGAAACACAGGAGAGTTGACATGAAGGCTGTTAAAGGATGGGCAAAGCAGATTTTAATGGGTTTAAACTATCTCCACAGTCACAACCCACCTATTATGCACAGGGACCTGAAGTGTGATAATATATTTATTAATGGTCACCGAGGAGAAGTTAAAATTGGAGATCTAGGGTTGGCAACTCTGTTGAAGCAGACTAATGCCAAGAGTGTAATTGGAACCCCGGAGTTCATGGCACCTGAACTGTATGATGAACATTATAATGAATTAGCCGACATATATTCTTTTGGGATGTGCATGCTTGAGTTGGTTACGTCTGAATATCCTTACAGTGAATGTAGAAACTCAGCTCAGATATACAAGAAAGTTTCATCCGTGCGTATTCTTATTGATAATACTCTTTTTCTTTAA 783 0.4061 MSLMETESSEEGAGLLEPPDPNVLEIDPTNRYVRYKEVIGQGAFKTVYKAFDEINGLEVAWSQVQIDEVLQTPGGLERLYSEVHLLKSLKHDSIVAFYNSWIDDKHRTLNLITELFTSGNLRQYSKKHRRVDMKAVKGWAKQILMGLNYLHSHNPPIMHRDLKCDNIFINGHRGEVKIGDLGLATLLKQTNAKSVIGTPEFMAPELYDEHYNELADIYSFGMCMLELVTSEYPYSECRNSAQIYKKVSSVRILIDNTLFL 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01667 260 FunFam WNK protein kinase 116 255 - -
Pumo10g01667 260 Gene3D Transferase(Phosphotransferase) domain 1 116 256 - -
Pumo10g01667 260 SMART serkin_6 33 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g01667 260 SUPERFAMILY Protein kinase-like (PK-like) 29 252 IPR011009 -
Pumo10g01667 260 PIRSF ILK 8 256 - -
Pumo10g01667 260 ProSitePatterns Serine/Threonine protein kinases active-site signature. 157 169 IPR008271 GO:0004672|GO:0006468
Pumo10g01667 260 ProSiteProfiles Protein kinase domain profile. 33 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g01667 260 FunFam Probable serine/threonine-protein kinase WNK1 18 114 - -
Pumo10g01667 260 MobiDBLite consensus disorder prediction 1 22 - -
Pumo10g01667 260 Gene3D Phosphorylase Kinase; domain 1 19 114 - -
Pumo10g01667 260 Pfam Protein kinase domain 35 249 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g01667 260 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 22 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01667 Pumo-Chr10 21878788 21880233 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01667 25 249 MAP Kinase Kinase Kinase AT5G41990 72.889 2.25e-120 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Pumo10g01667 Pkinase 3.6e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01667 K08867 - gmx:121175054 489.96