Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01664 ATGGCATGTGAAGGCATAAACAAATTGGCGAGGGTGGTGGGAGTGGGAAATCACTGTTACCTTTTGAAATCGAAAATCGGAGAGGGTTCATTCTCCGCCGTGTGGAGAGCGGAGCAGAGACCAACCGGTGATGACGTGGCGGTCAAGCAGGTCTTCCTCTCCAAACTCAATCCTCGCCTTAAGTCTTGTTTGGATTGCGAGGTCAATTTCTTGTCCTCTGTTAATCACCCCAACATTGTTCGCCTTTTTCACTTCTTCCAGGATGATGGATGTGTGTACCTGGTCCTGGAGTTTTGTGCTGGAGGGAATCTAGCTTCTTATATTCAAAGCCATGGGAGAGTTCAACAACATACGGCCAGAAAATTCATGCAGCAGCTTGGGTCTGGTCTAAAAGTATTACACTCTCATGACATTATTCACAGAGACTTGAAACCAGAGAACATTTTGCTATCAAGCCACGGGGTTGATGCAGTGCTAAAGATAGCTGATTTTGGTCTCTCAAGGACTGTACGTCCCGGTGAATATGCTGAGACAGTTTGTGGTTCTCCATTATATATGGCTCCAGAAGTTCTTCAGTTCCAGAGATATGACGACAAGGCAGACATGTGGAGTGTTGGGGCAATTCTTTTTGAGCTTCTAAATGGCTACCCACCTTTTAATGGCAGAAATAATGTTCAGGTGTTGAGAAACATCAGATCCTGCACCTGTCTTCCATTTTCTCAACTGATTCTTTCAGGATTGGATCCTGACTGTCTTGATATTTGTTCAAGGCTACTATGCTTAAATCCAGGTTATGCAAATTTTTTATTCTACATTTTTTCGTATTCACTCAATTTCCTGTGGAAATCTAATTATTTCTGA 861 0.4321 MACEGINKLARVVGVGNHCYLLKSKIGEGSFSAVWRAEQRPTGDDVAVKQVFLSKLNPRLKSCLDCEVNFLSSVNHPNIVRLFHFFQDDGCVYLVLEFCAGGNLASYIQSHGRVQQHTARKFMQQLGSGLKVLHSHDIIHRDLKPENILLSSHGVDAVLKIADFGLSRTVRPGEYAETVCGSPLYMAPEVLQFQRYDDKADMWSVGAILFELLNGYPPFNGRNNVQVLRNIRSCTCLPFSQLILSGLDPDCLDICSRLLCLNPGYANFLFYIFSYSLNFLWKSNYF 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01664 286 ProSiteProfiles Protein kinase domain profile. 20 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g01664 286 SUPERFAMILY Protein kinase-like (PK-like) 19 263 IPR011009 -
Pumo10g01664 286 Pfam Protein kinase domain 22 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g01664 286 FunFam Serine/threonine-protein kinase ATG1t isoform B 15 153 - -
Pumo10g01664 286 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
Pumo10g01664 286 ProSitePatterns Protein kinases ATP-binding region signature. 26 49 IPR017441 GO:0005524
Pumo10g01664 286 FunFam Aurora kinase A 15 102 - -
Pumo10g01664 286 Gene3D Transferase(Phosphotransferase) domain 1 16 265 - -
Pumo10g01664 286 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 18 263 IPR045269 GO:0004674|GO:0006914
Pumo10g01664 286 SMART serkin_6 20 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01664 Pumo-Chr10 21857988 21860392 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01664 20 263 CBL-interacting serine-threonine protein kinases AT2G30360 37.450 5.92e-47 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Pumo10g01664 Pkinase 1.4e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01664 - - lja:Lj1g3v1289070.2 451.055