Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01661 ATGATTCCCTCTCTCTCCTCTCTTCTCTTCTCCTCTCCCGTCCTTCAATTTCAATTTTTGGTCCCAACCCCAATTCCAATTTCAAATGCATTACACTCTCACTCTCACCAACCACACACTCTCTCTCTCTCCGCATATATATACCCCTCTCCTTCTTCCTCCTCCTTCTCTGTCATCAATCCTCTTTCCGTAGCCCTCAATCAGCGGAGAGAGAGAGAGAGAGAGTGCAAAGCCATCATCGTCTTCTTCTCCCACCTCGCCTTTGCTCATCCTCCATCTTCTCTATTCAAGATGGCTGATGCTGAGGATATTCAACCCCTTGTTTGTGACAATGGAACTGGAATGGTGAAGGCAGGATTTGCTGGGGATGATGCTCCTAGGGCTGTGTTTCCCAGTATTGTTGGCCGACCTCGTCATACTGGTGTTATGGTTGGGATGGGTCAAAAGGATGCCTATGTAGGTGACGAAGCCCAGTCAAAAGAGGTATTCTTACTTTGA 498 0.4759 MIPSLSSLLFSSPVLQFQFLVPTPIPISNALHSHSHQPHTLSLSAYIYPSPSSSSFSVINPLSVALNQRRERERECKAIIVFFSHLAFAHPPSSLFKMADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKEVFLL 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01661 165 PRINTS Actin signature 125 134 IPR004000 -
Pumo10g01661 165 PRINTS Actin signature 148 159 IPR004000 -
Pumo10g01661 165 FunFam Actin, alpha skeletal muscle 100 165 - -
Pumo10g01661 165 Pfam Actin 102 160 IPR004000 -
Pumo10g01661 165 SUPERFAMILY Actin-like ATPase domain 102 160 IPR043129 -
Pumo10g01661 165 Gene3D - 100 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01661 Pumo-Chr10 21808064 21809595 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01661 98 164 Cytoskeleton Gene Families AT3G12110 94.030 3.09e-40 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01661 K10355 - csin:114297071 132.88