Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01658 ATGCCCTTAGGCACGGCCATACATAACATAGAAATCACACTCGGAAAGGGTGGACAATTAGCTAGAGCAGCAGGTGCTGTAGCGAAACTAATTGCAAAAGAGGGGAAATCGGCCACATTAAAATTACCTTCTGGGGAGGTCCGTTTGATATCCAAAAACTGCTCGGCAACAGTCGGACAAGTGGGAAATGTTGGAGTAAACCAGAAAAATTTAGGTAGAGTTGGATCTAAATGTTGGCTAGATGGAATGCAGAGGAGCAACGGGTGCCCTCATTAA 276 0.4529 MPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKNLGRVGSKCWLDGMQRSNGCPH 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01658 91 SMART Ribosomal_L2_C_2 1 90 IPR022669 GO:0003735|GO:0005840|GO:0006412
Pumo10g01658 91 PANTHER RIBOSOMAL PROTEIN L2 1 80 IPR002171 GO:0003735|GO:0005840|GO:0006412
Pumo10g01658 91 Gene3D - 1 63 IPR014722 -
Pumo10g01658 91 FunFam 50S ribosomal protein L2 1 61 - -
Pumo10g01658 91 SUPERFAMILY Translation proteins SH3-like domain 1 82 IPR008991 -
Pumo10g01658 91 Pfam Ribosomal Proteins L2, C-terminal domain 1 86 IPR022669 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01658 Pumo-Chr10 21780835 21782415 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01658 1 79 Cytoplasmic Ribosomal Protein Gene Family AT3G51190 36.667 7.77e-10 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01658 K02886 - gmx:3989255 149.443