Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01642 ATGAGTTTGATGGAAACAGAAAGCTCAGAAGAGGGTGCAGGCCTTCTAGAGCCTCCTGATCCCAATGTTCTTGAAATTGATCCTACTAATCGTTACGTTAGGTATAAGGAAGTTATCGGCCAAGGAGCTTTCAAGACTGTTTACAAGGCATTTGATGAAATCAATGGACTTGAAGTTGCATGGAGCCAAGTTCAGATTGATGAGGTTTTACAGACACCAGGTGGCTTAGAGAGGCTGTACTCAGAAGTGCATCTCTTGAAGTCACTGAAGCATGATAGCATAGTAGCTTTCTACAATTCCTGGATTGATGACAAGCACAGGACTCTCAACTTGATTACTGAGTTGTTCACCTCAGGGAACCTCAGACAGTATAGTAAGAAACACAGGAGAGTTGACATGAAGGCTGTTAAAGGATGGGCAAAGCAGATATTAATGGGTTTAAACTATCTCCACAGTCACAACCCACCTATTATGCACAGGGACCTGAAGTGTGATAATATATTTATTAATGGTCACCGAGGAGAAGTTAAAATTGGAGATCTAGGGTTGGCAACTCTGTTGAAGCAGACTAATGCCAAGAGTGTAATTGGAACCCCGGAGTTCATGGCACCTGAACTGTATGATGAACATTATAATGAATTAGCCGACATATATTCTTTTGGGATGTGCATGCTTGAGTTGGTTACGTCTGAATATCCTTACAGTGAATGTAGAAACTCAGCTCAGATATACAAGAAAGTTTCATCCGGCATAAAGCCTGTTGCTCTTTCCAAACTCAAAGATCCAGAAGTAAAATCATTTATTGAGAAATGCCTTGTCCCAGCATCTCAAAGATTGTCAGCAAAGGAGCTTCTGATGGACAATTTTCTCCAAGTGAATGGTTCGTTGAAGAATCGTCGTCTTCCATTACCAGATATTGTTCTTCCTAAATATGGAGCCTACGAAAATCGTTGTCTTATGTCAGAAGGTCCCGCTAGTACACGCATTAGATCCATTTCAATGGATCTTGGTGATGCCACTGAGCTGCCATTGACCACTTTACTTTATAATTCTGTTGATTCTGTTGATGATGCATTGCCTTCCCCATGTGTTGAGATACGAAGGTTGAAGGAGGGTGACATATTTTTTCTAAAAGGTGAACAAAATGATGAAAAGTCTGTTTCATTAGTTCTCCGCATAGCTGATCAGAACGGGCGCGCAAGAAATATCCATTTCATATTCTACATCAACAGTGATACTGCCATCTCAGTTTCAAGTGAAATGGTTGAGCAACTTGAACTTGCAGAGCAGAATGTTAAATTCATAGCGGAGTTAATTGATCTGTTATTGATAACTTTGCTTCCTGATTGGAAACCTTGTGTAGCGATTGATCATTTAGTTTCTTCTAATGGTAAACTAACTCGTTCGAGTCAACAGAAAAACTCAAAGTTATACAGGCAAAGTTCAAAAGATTCTAGCCAAATTGTGGCTGAAGATGTAGGTCTCTCAACCTCATCCAGAAGATCAGCAGAAAAGGAAAACATTGATAATGTGATTTGTGACAAGTTTTTGTCCAATGCAAACATTGGTCTTCAAAGAGAAATAAAGACGGATGATTTGTATCCTGAGAAACATTGGTCATACACTTCTGCAACATCTGACTTCAATGATAAGCATTTTTCTACAGTTTCATTCATGTCTGCTAAATCAGGATTTACAGACAATGACTTGCCTAGAGTTAATAGTCAAAGCTCACTTACATCTGAATTCGGGGCATCATCTGATTATAGGAGTTTTCCATGCATGGAAAGCAATGGTACGATGAAATTCTCTTGTCATCCCATTAGTGCTTCCTCCTCATATGAACCTGGGAATGAGTTGAGAATAGAGTTAGAGATGATAGAACAGCAGTATCAGGAGGAAATGAAAGATTTATTGAAAAGAAGATACCAGGACATCACGGAGGCCAGAAGGAAGCATTCACAATTAAATGCAAGCATAAAATAA 1986 0.3943 MSLMETESSEEGAGLLEPPDPNVLEIDPTNRYVRYKEVIGQGAFKTVYKAFDEINGLEVAWSQVQIDEVLQTPGGLERLYSEVHLLKSLKHDSIVAFYNSWIDDKHRTLNLITELFTSGNLRQYSKKHRRVDMKAVKGWAKQILMGLNYLHSHNPPIMHRDLKCDNIFINGHRGEVKIGDLGLATLLKQTNAKSVIGTPEFMAPELYDEHYNELADIYSFGMCMLELVTSEYPYSECRNSAQIYKKVSSGIKPVALSKLKDPEVKSFIEKCLVPASQRLSAKELLMDNFLQVNGSLKNRRLPLPDIVLPKYGAYENRCLMSEGPASTRIRSISMDLGDATELPLTTLLYNSVDSVDDALPSPCVEIRRLKEGDIFFLKGEQNDEKSVSLVLRIADQNGRARNIHFIFYINSDTAISVSSEMVEQLELAEQNVKFIAELIDLLLITLLPDWKPCVAIDHLVSSNGKLTRSSQQKNSKLYRQSSKDSSQIVAEDVGLSTSSRRSAEKENIDNVICDKFLSNANIGLQREIKTDDLYPEKHWSYTSATSDFNDKHFSTVSFMSAKSGFTDNDLPRVNSQSSLTSEFGASSDYRSFPCMESNGTMKFSCHPISASSSYEPGNELRIELEMIEQQYQEEMKDLLKRRYQDITEARRKHSQLNASIK 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01642 661 FunFam Probable serine/threonine-protein kinase WNK1 18 114 - -
Pumo10g01642 661 SUPERFAMILY Protein kinase-like (PK-like) 34 291 IPR011009 -
Pumo10g01642 661 Gene3D - 385 489 - -
Pumo10g01642 661 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 22 653 - -
Pumo10g01642 661 Coils Coil 617 641 - -
Pumo10g01642 661 Pfam Protein kinase domain 35 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g01642 661 ProSitePatterns Serine/Threonine protein kinases active-site signature. 157 169 IPR008271 GO:0004672|GO:0006468
Pumo10g01642 661 Gene3D Phosphorylase Kinase; domain 1 19 114 - -
Pumo10g01642 661 FunFam probable serine/threonine-protein kinase WNK9 116 295 - -
Pumo10g01642 661 SMART serkin_6 33 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g01642 661 MobiDBLite consensus disorder prediction 1 22 - -
Pumo10g01642 661 FunFam Serine/threonine-protein kinase WNK8 385 479 - -
Pumo10g01642 661 CDD STKc_WNK 31 290 - -
Pumo10g01642 661 ProSiteProfiles Protein kinase domain profile. 33 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g01642 661 Gene3D Transferase(Phosphotransferase) domain 1 116 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01642 Pumo-Chr10 21595461 21599064 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01642 133 487 MAP Kinase Kinase Kinase AT1G49160 66.197 1.68e-168 487
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Pumo10g01642 Pkinase 6.9e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01642 K08867 - gmx:121175054 1168.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01642 10 21595461 21599064 Pumo10g01642 10 21595461 21599064 ECH