Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01639 ATGGCATGTGAAGGCATAAACAAATTGGCGAGGGTGGTGGGAGTGGGAAATCACTGTTACCTTTTGAAATCGAAAATCGGAGAGGGTTCATTCTCGGCCGTGTGGAGAGCGGAGCAGAGACCAACCGGTGATGACGTGGCGGTCAAGCAGGTCTTCCTCTCCAAACTCAACCCTCGCCTTAAGTCTTGTTTGGATTGCGAGGTCAATTTCTTGTCCTCTGTTAATCACCCCAACATTGTTCGCCTTTTTAACTTCTTCCAGGATGATGGATGTGTGTACCTGGTCCTGGAGTTTTGTGCTGGAGGGAATCTAGCTTCTTATATTCAAAGCCATGGGAGAGTTCAACAACATACGGCCAGAAAATTCATGCAGCAGCTTGGGTCTGGTCTAAAAGTATTACACTCTCATGACATTATTCACAGAGACTTGAAACCAGAGAACATTTTGCTATCAAGCCACGGGGTTGATGCAGTGCTAAAGATAGCTGATTTTGGTCTCTCAAGGACTGTACGTCCCGGTGAATATGCTGAGACAGTTTGTGGTTCTCCATTATATATGGCTCCAGAAGTTCTTCAGTTCCAGAGATATGACGACAAGGCAGACATGTGGAGTGTTGGGGCAATTCTTTTTGAGCTTCTAAATGGCTACCCACCTTTTAATGGCAGAAATAATGTTCAGGTGTTGAGAAACATCAGATCCTGCACCTGTCTTCCATTTTCTCAACTGATTCTTTCAGGATTGGATCCCGACTGTCTTGATATTTGTTCAAGGCTACTATGCTTAAATCCAGTGGAGCGCCTCTCCTTTGATGAATTTTATTGGCATAGCTTTCTACAAAGAAAATTGATGGGAACATGA 858 0.4441 MACEGINKLARVVGVGNHCYLLKSKIGEGSFSAVWRAEQRPTGDDVAVKQVFLSKLNPRLKSCLDCEVNFLSSVNHPNIVRLFNFFQDDGCVYLVLEFCAGGNLASYIQSHGRVQQHTARKFMQQLGSGLKVLHSHDIIHRDLKPENILLSSHGVDAVLKIADFGLSRTVRPGEYAETVCGSPLYMAPEVLQFQRYDDKADMWSVGAILFELLNGYPPFNGRNNVQVLRNIRSCTCLPFSQLILSGLDPDCLDICSRLLCLNPVERLSFDEFYWHSFLQRKLMGT 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01639 285 FunFam Aurora kinase A 15 102 - -
Pumo10g01639 285 Gene3D Transferase(Phosphotransferase) domain 1 16 284 - -
Pumo10g01639 285 SUPERFAMILY Protein kinase-like (PK-like) 17 280 IPR011009 -
Pumo10g01639 285 FunFam - 143 284 - -
Pumo10g01639 285 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
Pumo10g01639 285 ProSiteProfiles Protein kinase domain profile. 20 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g01639 285 ProSitePatterns Protein kinases ATP-binding region signature. 26 49 IPR017441 GO:0005524
Pumo10g01639 285 Pfam Protein kinase domain 22 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g01639 285 SMART serkin_6 20 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g01639 285 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 18 279 IPR045269 GO:0004674|GO:0006914
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01639 Pumo-Chr10 21573727 21576207 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01639 20 272 CBL-interacting serine-threonine protein kinases AT2G30360 37.308 1.23e-49 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Pumo10g01639 Pkinase 2.3e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01639 - - lja:Lj1g3v1289070.2 493.041