Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01637 ATGGCTGCCATGAACTCTAGCGTGTTGGCCTGTAGCTATGCCATATCAGGTGCAGCATGCTCCGAGCTCAATGGGAAGGTCACTTCCGTGCCCTCTGTTGCATCCTCTGGCTACAAGTTGCCATTGATCAAAGCTGAGGCCAGAGTTCCCAAAGCCAAAGAATCTGAAGGAAGGAGAGGTGCCCTTGTTCTCTTGGCAGCTACACTTTTCACCTCTGCAGCTGCAGCCTCCAATTCTTCTGCCAATGCTGGGATCATTGAAGATTACCTTGAGAAGAGCAAGGCCAACAAGGAATTGAATGACAAGAAGAGGTTAGCTACTGTTGGAGCAAACTTTGCAAGAGCATACACCGTGGAATTCGGCAGTTGCAAGTTCCCTGAGAACTTCACTGGTTGCCAAGATCTTGCCAAACAAAAGAAAGTACCATTCCTTAGTGACGATTTGGAGCTTGAATGTGAAGGAAAGGACAAATACAAGTGCGGTTCTAATGTTTTCTGGAAATGGTGA 507 0.4734 MAAMNSSVLACSYAISGAACSELNGKVTSVPSVASSGYKLPLIKAEARVPKAKESEGRRGALVLLAATLFTSAAAASNSSANAGIIEDYLEKSKANKELNDKKRLATVGANFARAYTVEFGSCKFPENFTGCQDLAKQKKVPFLSDDLELECEGKDKYKCGSNVFWKW 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01637 168 FunFam Photosystem I reaction center subunit N 84 168 - -
Pumo10g01637 168 Gene3D - 84 168 IPR044907 -
Pumo10g01637 168 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT N, CHLOROPLASTIC 1 168 IPR008796 GO:0009522|GO:0015979
Pumo10g01637 168 Pfam Photosystem I reaction centre subunit N (PSAN or PSI-N) 48 168 IPR008796 GO:0009522|GO:0015979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01637 Pumo-Chr10 21543918 21545748 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01637 1 139 Calmodulin-binding Proteins AT5G64040 65.972 3.53e-58 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01637 K02701 - gmx:100306036 290.812