Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01633 ATGCTGGAAACCTCAACTTTACCGGAAACCCCCATAGAGAACCCGGACGGCGCCGCGGCGGCGGCGGTCTCCGACGGGTCCAAAGCGGAGCACGGCGAAGACGGCGACCGGAATTCCGCCGCGAACCGGTGGCCGAGAGAGGAGACAATGGCTTTGCTCAAGATAAGGTCCGAAATGGACGTTGCTTTCAAAGATACAAACCCCAAAGCCCCTCTCTGGGAACAAGTCTCAAGGAAATTAGGGGAGCTAGGATATAATAGGAGTGCGAAGAAGTGCAAGGAGAAATTCGAGAACATTTACAAGTACCATAGGAGGACTAAGGAAGGTCGATGTGGCAAATCAAACGGTACAAAAACTTATCGATTTTTCGAGCAGTTGGAAGCTTTAGACGGAAACCACTCACTTATTCCCCCTCCGACAACAGCAACAACACACGTGCCCGACGACGACAACAACAACGTTAACGTTGATGATGTTATCCTCAACGCGGTTCCGTGTTCCGTTAGTGCGGCGCACGAGCATTCTAGTTCGACGACGTCGTGTTCGGGCTCGAAGAAGCGGAAGCTGACGCAGTTTCTGGAGGGGCTGATGAGGCAAGTGATAGAGAAGCAAGAGACGCTGCAGAGGAAGTTCATGGAAGTGTTTGATAAGTGTGAGAAAGATCGAATGGCGAGAGAAGAAGCGTGGAAGAAAGAGGAACTCGCGCGGATTAAGAAAGAACGCGAACTTCTCGCTCAGGAAAGGTCAATTGCTGCAGCGAAAGATGCAAGCCGTGCTTGCTTTTTTAAGAAAGTTTGCAGAAGCACAAGGCACGGTGCAGTTGCTCGAGAAAATTCAGGTTCAAAACGACAAAGACATGCAACAAAATGGGAATGTTAA 879 0.5028 MLETSTLPETPIENPDGAAAAAVSDGSKAEHGEDGDRNSAANRWPREETMALLKIRSEMDVAFKDTNPKAPLWEQVSRKLGELGYNRSAKKCKEKFENIYKYHRRTKEGRCGKSNGTKTYRFFEQLEALDGNHSLIPPPTTATTHVPDDDNNNVNVDDVILNAVPCSVSAAHEHSSSTTSCSGSKKRKLTQFLEGLMRQVIEKQETLQRKFMEVFDKCEKDRMAREEAWKKEELARIKKERELLAQERSIAAAKDASRACFFKKVCRSTRHGAVARENSGSKRQRHATKWEC 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01633 292 SMART sant 40 102 IPR001005 -
Pumo10g01633 292 CDD GT1 42 107 - -
Pumo10g01633 292 Gene3D - 44 105 - -
Pumo10g01633 292 MobiDBLite consensus disorder prediction 1 45 - -
Pumo10g01633 292 MobiDBLite consensus disorder prediction 27 45 - -
Pumo10g01633 292 ProSiteProfiles Myb-like domain profile. 36 100 IPR001005 -
Pumo10g01633 292 PANTHER FI21293P1 19 267 - -
Pumo10g01633 292 FunFam Trihelix transcription factor GT-2 44 105 - -
Pumo10g01633 292 Pfam Myb/SANT-like DNA-binding domain 42 129 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01633 Pumo-Chr10 21501713 21502760 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01633 36 266 Trihelix Transcription Factor Family AT1G76880 44.803 4.22e-66 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pumo10g01633 Myb_DNA-bind_4 2.3e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01633 - - gmx:100805632 402.519
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01633 10 21501713 21502760 Pumo10g01633 10 21501713 21502760 ECH