Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01632 ATGAGTAGTTCGCGGTGGCCGAAGGATGAAGTTGAAGCTTTGATAAGGTTGAGAACACAGCTTGATGTGCAGGCTCAAGGGAATAATAGTAATAATACTAATGGGACTAAGGGGCCTCTTTGGGAGGAGATATCTTCGGCAATGAAGGGTCTTGGTTATGATCGAAGTGCTAAGAGGTGTAAAGAGAAATGGGAGAACATAAACAAGTACTTCAAGAGGATGAAGGAGAAGAACAAGAGGAAGCCTCAGGATTCAAAAACGTGCCCCTATTATCACCACCTTGAGGCTTTGTACAGCAAGAAGCCTAAGAAGGTGGATGAGAATAGTTCTGGGAATAACGAGTTGAAGCCTGAGGAGCTTTTGATGCATATCATGGAGAGTCAAAGTCAAGAACAGCAGCAACAACAGATGCAGACTCAGTCATCATCTGAAGATGCTGAGAGAGAGAACACGGATCAGAATCAGGGAGATAATGAAGATCAAAGTGGGTATCAGAATCAGATGGTTGATAATAATAGTCATTCTTCCATAGCAATTATGAGTTAA 546 0.4231 MSSSRWPKDEVEALIRLRTQLDVQAQGNNSNNTNGTKGPLWEEISSAMKGLGYDRSAKRCKEKWENINKYFKRMKEKNKRKPQDSKTCPYYHHLEALYSKKPKKVDENSSGNNELKPEELLMHIMESQSQEQQQQQMQTQSSSEDAERENTDQNQGDNEDQSGYQNQMVDNNSHSSIAIMS 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01632 181 MobiDBLite consensus disorder prediction 156 181 - -
Pumo10g01632 181 ProSiteProfiles Myb-like domain profile. 1 68 IPR001005 -
Pumo10g01632 181 MobiDBLite consensus disorder prediction 125 144 - -
Pumo10g01632 181 MobiDBLite consensus disorder prediction 22 41 - -
Pumo10g01632 181 MobiDBLite consensus disorder prediction 98 181 - -
Pumo10g01632 181 MobiDBLite consensus disorder prediction 22 40 - -
Pumo10g01632 181 CDD GT1 4 75 - -
Pumo10g01632 181 Gene3D - 6 73 - -
Pumo10g01632 181 PANTHER FI21293P1 2 158 - -
Pumo10g01632 181 Pfam Myb/SANT-like DNA-binding domain 4 97 IPR044822 -
Pumo10g01632 181 SMART sant 2 70 IPR001005 -
Pumo10g01632 181 FunFam Trihelix transcription factor GT-2 6 73 - -
Pumo10g01632 181 MobiDBLite consensus disorder prediction 98 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01632 Pumo-Chr10 21501088 21501633 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01632 5 97 Trihelix Transcription Factor Family AT1G76890 45.161 6.33e-19 81.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pumo10g01632 Myb_DNA-bind_4 3.2e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01632 - - gmx:100787329 271.166