Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01628 ATGAAACGAAACAACCCTTATTTGGTTGTGATTCTCATACAAGCCATATATGCTGCTATGTTTCTTCTCTCAAAAGCTGCATTCGATCATGGCATGAACAATTTCATCTTCGTCTTCTATAGACAGGGTATAGCAACCCTCTTTTTGACCCCTTTCACGTTCTTCTTCGAATGGAAAACTGCACCGCCTATGCCCTTTTGGACCTTCTGCAAGATTTTCTTCCTTTCTTTATTTGGGATTACTTTAAGCTTGGACATATATGGTATCGGCCTTATTTACACCTCAGCAACTTTGGCTGCTGCTACCACAAACTGTCTTCCAGTTATCACCTTCTTCTTGGCGCTCCTACTAAGGATTGAGAGTTTGAAAATAAAGACAACCCCTGGAATTGCTAAGTTGATAGGCATTGTGGCATGCTTGACTGGTGCAGCAACCCTTGCCTTTTATAAAGGCCCTTCTTTGAAATTTTTAAGCCATTTTCACCTTTTGGATTACCATAAAAGCTTACAACATCAAGGTCATGCTCAATCCGGTGCATGGGTAAAGGGTTGCTTCCTCATGCTCCTCTCCAACACGTTTTTCGGGCTGTGGCTTGTACTACAGGCTTTTATTATAAAAGGGTACCCTTCAAAGCTGCTCTTCACAACTATTCAGTGTTTCTTAAGTTCAATTCAGTCTTTTGTCGTTGCCTTGGCCGTGGAAAGGGACATTGAGCAATGGAAGTTGGGTTGGAATGTCAGGCTCCTCGCCGTACTATATTGTGGAATTATGGTCACGGGTGTCACATATTACTTACAAACATGGGTCATAGAAAAGAAAGGACCCGTGTTTCTAGCCATGTCAACTCCATTGGCTCTTATTATTACAATCTTCGCCTCTGCAACTGTCTTGGGTGAGATAATCAGTTTGGGAAGGTACAACATTGTTCCACTAATAAATTTTCCAAAGCTTAATGGCTATTTAATTATAAATTGGAAAACTGATCATTCATTAAGCTTCCTGCACAAGTCACTTCCCATGTGTTATGTGTTTTGTGCTGGAATATAA 1047 0.4088 MKRNNPYLVVILIQAIYAAMFLLSKAAFDHGMNNFIFVFYRQGIATLFLTPFTFFFEWKTAPPMPFWTFCKIFFLSLFGITLSLDIYGIGLIYTSATLAAATTNCLPVITFFLALLLRIESLKIKTTPGIAKLIGIVACLTGAATLAFYKGPSLKFLSHFHLLDYHKSLQHQGHAQSGAWVKGCFLMLLSNTFFGLWLVLQAFIIKGYPSKLLFTTIQCFLSSIQSFVVALAVERDIEQWKLGWNVRLLAVLYCGIMVTGVTYYLQTWVIEKKGPVFLAMSTPLALIITIFASATVLGEIISLGRYNIVPLINFPKLNGYLIINWKTDHSLSFLHKSLPMCYVFCAGI 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01628 348 SUPERFAMILY Multidrug resistance efflux transporter EmrE 40 150 - -
Pumo10g01628 348 Pfam EamA-like transporter family 6 144 IPR000620 GO:0016020
Pumo10g01628 348 Pfam EamA-like transporter family 182 304 IPR000620 GO:0016020
Pumo10g01628 348 PANTHER WAT1-RELATED PROTEIN 6 304 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01628 Pumo-Chr10 21395754 21400354 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01628 1 254 Nodulin-like Gene Family AT5G64700 60.465 3.46e-97 287
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01628 - - gmx:100804562 575.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01628 10 21395754 21400354 Pumo10g01628 10 21395754 21400354 ECH
Pumo6g00708 6 8852910 8858069 Pumo10g01628 10 21395754 21400354 PCT