Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01627 ATGGGTGAACTAAAGCCATATTTAGCAGTGTTTATAATTCAATTAATATATTCAGGGCTAACCTTGCTGTCCAAGGCAGCGTTTAACGGGGGAATGAATACATGTGTGTTTATCTTTTATAGACAGTTGACTGGTACCGTTATTTTGGTCCCCCTGGCCTTGATACTTGAAAGAAAAAGGGCAGTGCCAGTGTCACTTTCATTTTCGACCTTCTGCAAGATTTTTGTGTTTTCATTTTTTGGAATCACTCTGGCTCTAAATATGCAAGCTATTGCCCTTGTTTACACGTCTGCCACGTTGGCCGCCGCAATTGTTAATTCCCTCCCCGCAACTACGTTTTTCTTTGCTGTGCTGCTCAGAATGGAGAAGGTAAATATAAGGACGAAATCTGGAATTACAAAGATAGGAAGTGTATTACTGTGCTTGGTTGGTGTAGTGACCCTAGCATTTTACAAGGGACCCCAGGTAAGGACTGCACATCGCATCCTATCCGGATACCACAGTCCACACCATGAAAACCATTTTTCATCTGGCAAAAGATGGATATTGGGTTCTTCACTCTTGTTCTTAGGCGTCATCATGTGGAGTTTTTGGCTTACAATTCAGGCTCAAATTCTTAAAAGCTACCCTGCAAAACTGAAGTTCTCGAGCCTTCAGTGCCTGTCAAGTTCAATTCAGTCATTTGGTATTGCTATAGCTTTTGAAAGAGATATTCAGCAGTGGAAGTTGGGTTGGAACATGAGACTGATTGCAGTTCTTTACTGTGGGGCACTGGTGACTGGGGTCGCCTACTACTTGCAAGCTTGGGTGATCGAAAAGAGAGGACCAGTTTTTCCAGCAATGTGGAACCCACTGAGTTTTATGCTTGCTACGACAGGTTCGATATTGCTCTTGGGCGAGCCCCTATGTTTGGGAAGCGTTCTAGGAGGGATTCTACTGGTTTTGAGCCTCTACAGTGTTTTGTGGGCAAAAAGCAAAGAAGGAATGACTCATCAGAATTCTTTACCCGTTAAAGAATGTGCAGAGGTGAAAACTGAGGCCAGTAGCACGGAACCACCGCAACCCGTGTAA 1071 0.4379 MGELKPYLAVFIIQLIYSGLTLLSKAAFNGGMNTCVFIFYRQLTGTVILVPLALILERKRAVPVSLSFSTFCKIFVFSFFGITLALNMQAIALVYTSATLAAAIVNSLPATTFFFAVLLRMEKVNIRTKSGITKIGSVLLCLVGVVTLAFYKGPQVRTAHRILSGYHSPHHENHFSSGKRWILGSSLLFLGVIMWSFWLTIQAQILKSYPAKLKFSSLQCLSSSIQSFGIAIAFERDIQQWKLGWNMRLIAVLYCGALVTGVAYYLQAWVIEKRGPVFPAMWNPLSFMLATTGSILLLGEPLCLGSVLGGILLVLSLYSVLWAKSKEGMTHQNSLPVKECAEVKTEASSTEPPQPV 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01627 356 SUPERFAMILY Multidrug resistance efflux transporter EmrE 40 152 - -
Pumo10g01627 356 SUPERFAMILY Multidrug resistance efflux transporter EmrE 250 325 - -
Pumo10g01627 356 PANTHER WAT1-RELATED PROTEIN 6 328 IPR030184 GO:0016020|GO:0022857
Pumo10g01627 356 Pfam EamA-like transporter family 5 133 IPR000620 GO:0016020
Pumo10g01627 356 Pfam EamA-like transporter family 184 321 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01627 Pumo-Chr10 21378759 21385446 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01627 1 255 Nodulin-like Gene Family AT5G64700 52.692 3.09e-79 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01627 - - vun:114162763 524.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01627 10 21378759 21385446 Pumo10g01627 10 21378759 21385446 ECH