Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01603 ATGGATTACTATTATGGAAACCCTAATCCTAACCCTTATTACCGTCACTCTTCCGTAGTGAACATGGCGTCTCCCACCTCCGAGTTCATGTTATCTGATTATCTCGTGTTGGAAGATGCTGTTGTTGATCATCAGGAGTCTTGGTCACAAAGCACTGAAACTGAATCGTCGGAGAAAGCGACCTCCAGCGATGCCAGTCATGGATTCGGTGATGCAACCTCCACCACCACCACCACCAACATGCATATAAAGTACGGAAATAATGGGATTAAGCGAAAGACGGCAGAAGTGAGTCAAAGGATCACGTTTAGAACCAGATCGCAGCTTGAGGTTATGGATGATGGATATAAGTGGAGGAAATACGGAAAGAAGACAGTGAAGAACAGTCCCAACCCAAGGAACTACTACAAGTGTTCAGGTGAAGGATGCAATGTGAAGAAAAGGGTGCAAAGGGATGGGGATGACTCGAACTATGTGTTAACAACGTACGACGGTGTCCACAATCATGAGAGCCCCTCCACTGCCTATTACAGCCAAATGTCCTTGGTGCATTCTAATGATGATTGGGCTCTGCGCCCTTCTGCAAACTCATCCTCCTCAATACAGTAA 609 0.4614 MDYYYGNPNPNPYYRHSSVVNMASPTSEFMLSDYLVLEDAVVDHQESWSQSTETESSEKATSSDASHGFGDATSTTTTTNMHIKYGNNGIKRKTAEVSQRITFRTRSQLEVMDDGYKWRKYGKKTVKNSPNPRNYYKCSGEGCNVKKRVQRDGDDSNYVLTTYDGVHNHESPSTAYYSQMSLVHSNDDWALRPSANSSSSIQ 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01603 202 MobiDBLite consensus disorder prediction 46 85 - -
Pumo10g01603 202 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 49 178 IPR044810 GO:0003700
Pumo10g01603 202 SMART WRKY_cls 112 171 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo10g01603 202 ProSiteProfiles WRKY domain profile. 107 172 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo10g01603 202 SUPERFAMILY WRKY DNA-binding domain 104 172 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pumo10g01603 202 Gene3D WRKY domain 96 173 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pumo10g01603 202 MobiDBLite consensus disorder prediction 46 87 - -
Pumo10g01603 202 FunFam WRKY transcription factor 57 98 172 - -
Pumo10g01603 202 Pfam WRKY DNA -binding domain 113 170 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01603 Pumo-Chr10 21056945 21059888 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01603 7 189 WRKY Transcription Factor Family AT5G64810 44.624 2.70e-48 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pumo10g01603 WRKY 4.4e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01603 - - gmx:100127396 308.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01603 10 21056945 21059888 Pumo10g01603 10 21056945 21059888 ECH