Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01578 ATGTTATCTGGTGACATTTCTGTTATACAGAACTGGGAAGCCGCATTGGAGGTCATTGATCTGAGTTCAAACAAGCTGTCAGGATCCTTGCCTTCTATTTTAGGAACCTATTCAAAATTGTCTACCGTTGACTTAAGTTTAAATGAACTTAAGGGATCCATTCCACAAGGTTTAGTTACTTCATCGTCAGTGACAAGACTAAATCTTTCTGGAAATCAATTTACAGGGCCACTTCTGCTTCAAGGTTCAGGAGCAAGTGAATTACTACTTATGCCTCCTTATCAACCAATGGAATATCTTGATGTATCTAATAACTCCTTAGAAGGTGTCTTGCCTTCTGAAATAGGTAGGATGGGTGGGCTCAAACTGCTGAATCTGGCAAGGAATGGCTTTTATGGACAGCTGCCAAATGAATTGAACAAACTTATTTATTTGGAGTACCTTGATTTGTCTGGCAACAAATTTACTGGAAATATTCCTGATAAGCTTGCATCCAGCTTAACTGTATTTAACGTGTCCAATAATGATCTATCTGGTCGTGTTCCTGAAAATTTGCGCCAGTTCTCTCCTTCATCCTTTCGCCCTGGAAATGGAAAGCTAATGTTACCAAATGATTCGCCCGAGACTTCTTCAGTGCCTGATAACATCCCAGATAAGGGTAGACATCATAGTTCAAAGGGTAATATCAGGATAGCAATTATTCTTGCCTCAGTGGGTGCTGCTATTATGATCGCTTTTGTTTTATTGGCTTATCATCGAACACAATTAAAAGAATTTCATGGAAGAAGTGAGTTCACTGGTCAAAATACTAGAAGAGATGTCAAGTTAGGAGGACTTTCAAGGTCTTCTCTCTTCAAGTTCAATACAAATGTTCAACCCCCAACATCGTCATTGAGCTTTTCAAATGATCACCTATTGACTTCCAATTCAAGGTCACTCTCTGGTGGACAGTCAGAGTTTGTAACTGAAATTTCTGAGCATGGCTTAACTCAGGGAATGGTGGCTACTAGTTCAGCATCTGTAAATCCTAATTTGATGGATATCCCTCCCACTTCATCTGGAAGGAAGTCTTCTCCCGGTTCCCCATTGTCGTCGTCCTCACCCCGTTTTAAAGAGGCTTGTGAAAAGCCAGTGATGTTGGATGTTTACTCACCAGATCGGTTGGCTGGGGAACTGTTTTTCCTGGATTCTTCCCTAGCATTCACTGCAGAGGAGTTATCTCGAGCTCCAGCTGAAGTTCTTGGCAGAAGTAGCCATGGCACTTTATACAAAGCAACTCTGGACAGTGGTCATATGTTGACTGTAAAATGGTTACGTGTGGGATTGGTCAAACATAAAAAGGAATTTGCTAGAGAAGTTAAAAGGATAGGTTCTATGAGGCATCCAAACATTGTCCCATTACTAGCTTACTATTGGGGGCCTAGGGAACAAGAAAGGCTTCTTTTAGCTGACTATATACATGGGGACAGCTTGGCTCTTCATCTCTATGGTAATAGTTAA 1500 0.41 MLSGDISVIQNWEAALEVIDLSSNKLSGSLPSILGTYSKLSTVDLSLNELKGSIPQGLVTSSSVTRLNLSGNQFTGPLLLQGSGASELLLMPPYQPMEYLDVSNNSLEGVLPSEIGRMGGLKLLNLARNGFYGQLPNELNKLIYLEYLDLSGNKFTGNIPDKLASSLTVFNVSNNDLSGRVPENLRQFSPSSFRPGNGKLMLPNDSPETSSVPDNIPDKGRHHSSKGNIRIAIILASVGAAIMIAFVLLAYHRTQLKEFHGRSEFTGQNTRRDVKLGGLSRSSLFKFNTNVQPPTSSLSFSNDHLLTSNSRSLSGGQSEFVTEISEHGLTQGMVATSSASVNPNLMDIPPTSSGRKSSPGSPLSSSSPRFKEACEKPVMLDVYSPDRLAGELFFLDSSLAFTAEELSRAPAEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVKHKKEFAREVKRIGSMRHPNIVPLLAYYWGPREQERLLLADYIHGDSLALHLYGNS 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01578 499 Gene3D Phosphorylase Kinase; domain 1 388 485 - -
Pumo10g01578 499 PANTHER OS07G0626500 PROTEIN 15 496 - -
Pumo10g01578 499 MobiDBLite consensus disorder prediction 188 224 - -
Pumo10g01578 499 ProSiteProfiles Protein kinase domain profile. 408 499 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g01578 499 SUPERFAMILY L domain-like 15 188 - -
Pumo10g01578 499 MobiDBLite consensus disorder prediction 340 368 - -
Pumo10g01578 499 Gene3D Ribonuclease Inhibitor 1 210 IPR032675 -
Pumo10g01578 499 SUPERFAMILY Protein kinase-like (PK-like) 411 497 IPR011009 -
Pumo10g01578 499 MobiDBLite consensus disorder prediction 340 370 - -
Pumo10g01578 499 Pfam Leucine Rich repeat 61 76 IPR001611 GO:0005515
Pumo10g01578 499 Pfam Leucine Rich repeat 143 157 IPR001611 GO:0005515
Pumo10g01578 499 FunFam Leucine-rich repeat receptor-like protein kinase 393 485 - -
Pumo10g01578 499 FunFam Leucine-rich repeat receptor protein kinase EMS1 90 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01578 Pumo-Chr10 20808371 20810433 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01578 2 78 Receptor kinase-like Gene Family AT5G01890 41.558 6.70e-08 53.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pumo10g01578 LRR_6 1.1 CL0022
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01578 - - gmx:100802768 907.901