Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01577 ATGACGCCGGCTGGAATTGCAGAGCAGATACTAAATCTCGGAGCACTTGGATACCGTGCTCCGGAACTCGCTACTGCATCCAAACCAGTTCCATCCTTTAAGGCAGATGTGTATGCACTTGGTGTGATCCTAATGGAATTGTTAACAAGAAAAAGTGCAGGTGACATAATATCAGGGCAATCAGGTGCTGTTGATCTTACAGATTGGGTTAGGCTGTGTGAGCGAGAAGGAAGGGTAATGGACTGTATTGACAGAGACATAGCAGGTGGGGAAGAATCCTCCAAAGAGATGGATGAACTGCTTGCAATATCTCTCAGGTGTATTCTCCCTGTAAATGAGAGGCCTAACATCAGACAAGTTTTTGACGATCTGTGTTCAATATCATCGGTTTGA 393 0.4504 MTPAGIAEQILNLGALGYRAPELATASKPVPSFKADVYALGVILMELLTRKSAGDIISGQSGAVDLTDWVRLCEREGRVMDCIDRDIAGGEESSKEMDELLAISLRCILPVNERPNIRQVFDDLCSISSV 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01577 130 PANTHER OS07G0626500 PROTEIN 1 129 - -
Pumo10g01577 130 SUPERFAMILY Protein kinase-like (PK-like) 13 124 IPR011009 -
Pumo10g01577 130 Gene3D Transferase(Phosphotransferase) domain 1 6 130 - -
Pumo10g01577 130 ProSiteProfiles Protein kinase domain profile. 1 130 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01577 Pumo-Chr10 20806872 20808352 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01577 13 120 Receptor kinase-like Gene Family AT1G15530 36.697 4.92e-15 68.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pumo10g01577 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01577 - - gmx:100802768 253.832