Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01575 ATGGGTGGTATAGGTGGCCATCTTCCTCTAGTGGTTATGATAGGTTTGCAAATTCACTATGCAGCACTTAACATCTTCACAAGAGCCATTCTGTTAGATGGGTTGAGTACAATAGTCTTTGTAGTGTACAGGCAAGGCATAGCCACTTTGTGTTTGGCGCCTATGTTACTCTCTCCCAAGAGGAGACAATCAATAAAGAACTCATTGGGATTCAGGAGCTTCTCTTTGATGTTTGTGACTGCTCTTGTTGGAATCACAGTAAATCAGAATGCATATTTTAGAGGTTTATATTATGCATCTTCTAGTGCAGCTACCGCAATGAGTAATCTGACACCTGCATTAACGTTTGTAATTGCAACAATTAAAATTGATGTACGAAGCTTAAGAAGCATGGCCAAGATACTAGGGACAGTTTATTGCGTGAGTGGAGCCTTAATAATGACATTGGTCAAAGGACAGAAGCTGTTACACTTTGAGTTCCTTCCTTCTATGCATCGTGGAGGTGAGGATTATTGGCTGCTGGGTTGTCTATTGCTCTTAGCAAGTAGTGTGTTTTGGTCATGTTGGATGATCCTGCAGGTGAATAAAAACAAATACCAATTAATTGCTTCATGCTGTCCAGACCATTTATTATCAACCTTTTGGATGTGTCTCTTTGCAACAATACAATCAGCCATATATGCACTGCTCTCTGAGCCGGATATTCAAGCATGGACTTTACAGTTTACATTCACCTCTACAATTTTCATGTTGTTTATATGCACGGTTAGCTTCTTTGCTCAATCCTGGTGCATCTCAGAAAGAGGTCCCCTGTATTGTGCAATGTTCAACCCTTTATCAACAGTCATCACTGCTTTGATAAGTGCAACATTCCTACAGGAAGAGGCATGCGTTGGAAGTTTGATTGGCGCTGTTGGAGTTATTGCTGGTTTATATATTGTGATTTGGGGTAAAGCCAAAGAGTCTGGTGAGAATAATTAA 981 0.4037 MGGIGGHLPLVVMIGLQIHYAALNIFTRAILLDGLSTIVFVVYRQGIATLCLAPMLLSPKRRQSIKNSLGFRSFSLMFVTALVGITVNQNAYFRGLYYASSSAATAMSNLTPALTFVIATIKIDVRSLRSMAKILGTVYCVSGALIMTLVKGQKLLHFEFLPSMHRGGEDYWLLGCLLLLASSVFWSCWMILQVNKNKYQLIASCCPDHLLSTFWMCLFATIQSAIYALLSEPDIQAWTLQFTFTSTIFMLFICTVSFFAQSWCISERGPLYCAMFNPLSTVITALISATFLQEEACVGSLIGAVGVIAGLYIVIWGKAKESGENN 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01575 326 PANTHER WAT1-RELATED PROTEIN 9 322 IPR030184 GO:0016020|GO:0022857
Pumo10g01575 326 SUPERFAMILY Multidrug resistance efflux transporter EmrE 215 319 - -
Pumo10g01575 326 Pfam EamA-like transporter family 174 315 IPR000620 GO:0016020
Pumo10g01575 326 Pfam EamA-like transporter family 12 148 IPR000620 GO:0016020
Pumo10g01575 326 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01575 Pumo-Chr10 20784304 20791779 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01575 1 321 Nodulin-like Gene Family AT4G30420 43.582 6.98e-88 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01575 - - gmx:100816384 470.314